Gene VC0395_A2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2064 
Symbol 
ID5137797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2222333 
End bp2222968 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content43% 
IMG OID640533521 
ProductTetR family transcriptional regulator 
Protein accessionYP_001217988 
Protein GI147675438 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAC GTAAAGTCGG CCGACCAAGC CAACAGACTC AAGCTCGTGA CCAGTTGATC 
ATGCATGCCC GTGAGCTTTT CTCTGTCATG CCTTATGACA AAGTATCGAC ACGTTTGATT 
GCGAGCAAAG CGGGCGTCGA TATCAGTTTA ATTCGCTATT ATTTTGCGAA TAAAGCTGGC 
TTATTTGAGA CCATGTTGCG TGAAACTTTG CTACCGATGA AAGCGCAGCT CGGGTTGTTG 
GTTGCTGAGA GTAGTCACCA AAATCTGACC GATTTAATGC GTACTTATTA TCGAGAAATG 
TTCAAAATAC CGTATTTCCC ACGTTTGATT ATGCAGGTGA TGAATACGCC TGGTAGCGAT 
ATGAAAAAGC AGTTGATTGA GAAAGTGGTT CTCGATATTA CGCGTCCGAT TCAGGAAACT 
TTGTTTGAGA AGCTGATTGA GCGAGGCGTG ATTCGAGAAG GTATGGATCC GCAACTGTGC 
AAAATTTCTT ACCTAAGTTT AATGATTTTT CCTTTTATCG CTCCGCCAGC CCTACTTAAG 
ATTCATGGGG TTGAATTATC ACAAACCTTC CTTGAAAGCT TGGTTGAGCA CAACATTCAG 
CTAATGGAAC AAGGGTTTAT AACGAGAATG GGATAA
 
Protein sequence
MTLRKVGRPS QQTQARDQLI MHARELFSVM PYDKVSTRLI ASKAGVDISL IRYYFANKAG 
LFETMLRETL LPMKAQLGLL VAESSHQNLT DLMRTYYREM FKIPYFPRLI MQVMNTPGSD 
MKKQLIEKVV LDITRPIQET LFEKLIERGV IREGMDPQLC KISYLSLMIF PFIAPPALLK 
IHGVELSQTF LESLVEHNIQ LMEQGFITRM G