Gene VC0395_A1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1462 
Symbol 
ID5137439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp1567304 
End bp1567816 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content47% 
IMG OID640532920 
Producthypothetical protein 
Protein accessionYP_001217405 
Protein GI147675296 
COG category[S] Function unknown 
COG ID[COG3013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCTTT ACATGGAAAT GACCAACGCT CAGCGTTTGA TCCTATCGAA CCAATATTTC 
CTTATGTCAC AACTCGACCC TAATAACGCA AACAAATACA AGCGCTTACA AACGATTGTT 
GAGCGTGGCT ATGAGCTACA CATGCGTGAA CTGAACCGCG AGTTTGGCTG CCTGCCTGAA 
ACCGAGTGTC GTGAAATCAT CGACATCATG GAGATGTATC ATGCGATGCA AGAATCCAAC 
AGAATGCTGG ACGATGCCGC ACGCAAAGAT GTAGATCAAC GCCGTTTGAC ATTCCTAGGC 
TTTGATATGG CGACCGAAGC ACAGTTGGTC AATTACGTCC GTTTCTTAGT GGACTCTGAA 
GGTCTCTATC CTCAGTTTGA TAAAGGCGAA CACCATTTCA ACAGCCAAAT GCCGATGTTG 
GCCAAATACC GCCGCATGCT GACCACTTGG CGCAACTGCC CACGCCAATA CCATCTGTCA 
GGTAATGAAT TGCGTCAAAT CATGAACGCC TAA
 
Protein sequence
MRLYMEMTNA QRLILSNQYF LMSQLDPNNA NKYKRLQTIV ERGYELHMRE LNREFGCLPE 
TECREIIDIM EMYHAMQESN RMLDDAARKD VDQRRLTFLG FDMATEAQLV NYVRFLVDSE 
GLYPQFDKGE HHFNSQMPML AKYRRMLTTW RNCPRQYHLS GNELRQIMNA