| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1374 |
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| Symbol | |
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| ID | 5135378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1479299 |
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| End bp | 1480195 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640532832 |
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| Product | dihydrodipicolinate synthetase family protein |
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| Protein accession | YP_001217317 |
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| Protein GI | 147675305 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TAACAGGTTT GATTGCTGCT CCACATACGC CTTTCACAAA AGATAACAAG
GTTAATTTTG CGGCGATTGA CCAAATTGCT GAGCTTCTGA TTGAACAAGG AGTGAAAGGT
GCTTATGTCT GCGGAACGAC AGGTGAGGGG ATCCATTGCT CTGTCGAAGA AAGAAAAGCA
ATTGCAGAAC GTTGGGTGAA AGCCGTTGAT GGGAAGTTAG ATGTTATTTT ACATACAGGC
GCTTTAAGTA TTGTTGATAC CATCAACTTG ACAGAGCACG CTGAAACACT GGATATCTTT
GCTACCTCCG CTATTGGCCC ATGCTTTTTC AAACCGGGAA GTGTTGATGA TTTAGTTGAG
TATTGTGCTC AAGTTGCTGC CGCAGCTCCT TCAAAAGGTT TTTATTACTA CCACTCAGGA
ATGTCGGGCG TGAATCTAGA TTTAGAGCAG TTCTTGATTA AAGGCGAACA GCGCATTCCT
AATCTTTATG GCGCAAAATT CAATAATGCT GATTTGTATG AATACCAGCG TTGCGTGCGA
GTATCGAATC GCAAATTTGA TATTCCATTT GGTGTGGATG AGTTTTTACC TGCTGGTTTA
GCCGTCGGTG CGGTAGGCGC AGTTGGTAGC ACTTATAACT ATGCTGCTCC ATTGTATTTG
AAAATCATTG AAGCATTTAA CCATGGTAAA CATGATGAAG TCGCAGCGTT GATGGATAAA
GTGATTGCGA TTATTCGAGT ATTGGTCGAA TACGGCGGTG TTGCGGCAGG TAAAGTTGCC
ATGCAGTTAC ATGGTATTGA TGCTGGGGAT CCCCGCTTAC CTATTCGTTC ATTGAATGAC
AAACAGAAAG CGGATGTGCT TGCGAAGATG CGTGATGCTG GGTTCCTGTC GATCTAA
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| Protein sequence | MKKLTGLIAA PHTPFTKDNK VNFAAIDQIA ELLIEQGVKG AYVCGTTGEG IHCSVEERKA
IAERWVKAVD GKLDVILHTG ALSIVDTINL TEHAETLDIF ATSAIGPCFF KPGSVDDLVE
YCAQVAAAAP SKGFYYYHSG MSGVNLDLEQ FLIKGEQRIP NLYGAKFNNA DLYEYQRCVR
VSNRKFDIPF GVDEFLPAGL AVGAVGAVGS TYNYAAPLYL KIIEAFNHGK HDEVAALMDK
VIAIIRVLVE YGGVAAGKVA MQLHGIDAGD PRLPIRSLND KQKADVLAKM RDAGFLSI
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