Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1366 |
Symbol | |
ID | 5137101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1465386 |
End bp | 1466774 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640532824 |
Product | hypothetical protein |
Protein accession | YP_001217309 |
Protein GI | 147674628 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGACAT TTTGGGCATC TCTGTGGCTA AGGTTCAGGG GTAAGCTGAT GAGCAATACT ATGATTAAGA AGATGCCCAA ATACGAGTCT TACAAAGACT CTTGTGAGCA ATGGATTGGT GACATCCCCG CTCATTGGGA AGTTTATAGG TTAAAAAGCG CTGTATATGA GTGCTCAAAT GGTATTTGGG GAAGTGATCC TAACGGTAGG GACGAAATAG TCGTGCTGAG GGTTGCTGAC TTTGATGATC ACAAACTCAA AATATCAGAT GAAAAACTTA CTTATCGCTC AATTCCAGCA AAAGAGCGCC AGGGGCGTCT GTTAAAAAAT GGAGATTTGC TGATCGAAAA ATCTGGTGGG GGAGATAAAA CTCTAGTCGG AAGAGTAGTA TTGTTTGATA AACAATACCC AGCAGTAACA TCTAATTTTG TCGCAAAAAT GACACCTAAA GAGTGGGTTA TATCTGGATT CTTGAAGTAC GTATTTTCTG CTTTATACAA TAATGGAGTT AACTATCTTT CTATAAAGCA AACTACTGGC ATACAGAATC TCGATGCTAG CTCATATCTA AATGAAAAAT TTTGTATCCC TCAAAAAGAG GAGCAATATG AAATAGCTAA GTTTCTCGAC AACAAAACGA CACAGATAAA TGAAGCAATC GCAATCAAAC AAAAGCAAAT CGAGCTGCTA AAAGAACGCA AACAAATCAT CATTCAGCAA GCAGTGACAC AAGGTTTGAA TCCCGATGCA ACGATGAAAT ATTCAGGTGT GGATTGGATA GGAGCTATTC CAGGGCATTG GATCGTCAAA AGAGCTAAAT ACCTTTTAGA TGAAATCAAT GAGCGTTCAG AGACAGGGCT TGAAGAGCTA CTTTCAGTTT CCCACATGAC TGGCGTAACT CCACGATCCG AGAAAAACGT CACCATGTTC ATGGCGGAAG ACTACACAGG TTCAAAGCTC TGCCACTCTG GTGATCTAGT GATCAACATA ATGTGGGCAT GGATGGGAGC GTTAGGTGTA TCTGACAGAA CTGGTATTGT GAGCCCATCA TATGGCGTAT TCCGTGAACA GCGCGAGGGC ACTTTTGTAC CTAAATATCT GGAGATGTTG CTGAAATCAA CTAAGTATGT TGAATACTAC AACAAGGTCT CTACAGGACT TCATTCTTCT CGATTACGTT TTTATGGGCA CATGTTGTTT GATATGGCTT TGGGCTTTCC TCCTTATGAA GAACAAACAC AAATTGTTGA ATACATAAGC AGAGAATGTT CGAAAGTTGA TGAAGCAATA ACTGTTCAGG CTGAGCAAGT AAGTAAGCTC AAAGAATACA AAACCACTCT CATCAACAGC GCTGTAACCG GCAAAATCAA AGTAACGGAG CTGGCGTAA
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Protein sequence | MLTFWASLWL RFRGKLMSNT MIKKMPKYES YKDSCEQWIG DIPAHWEVYR LKSAVYECSN GIWGSDPNGR DEIVVLRVAD FDDHKLKISD EKLTYRSIPA KERQGRLLKN GDLLIEKSGG GDKTLVGRVV LFDKQYPAVT SNFVAKMTPK EWVISGFLKY VFSALYNNGV NYLSIKQTTG IQNLDASSYL NEKFCIPQKE EQYEIAKFLD NKTTQINEAI AIKQKQIELL KERKQIIIQQ AVTQGLNPDA TMKYSGVDWI GAIPGHWIVK RAKYLLDEIN ERSETGLEEL LSVSHMTGVT PRSEKNVTMF MAEDYTGSKL CHSGDLVINI MWAWMGALGV SDRTGIVSPS YGVFREQREG TFVPKYLEML LKSTKYVEYY NKVSTGLHSS RLRFYGHMLF DMALGFPPYE EQTQIVEYIS RECSKVDEAI TVQAEQVSKL KEYKTTLINS AVTGKIKVTE LA
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