Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1328 |
Symbol | |
ID | 5136146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1415983 |
End bp | 1416801 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532786 |
Product | putative beta-ketoadipate enol-lactone hydrolase |
Protein accession | YP_001217272 |
Protein GI | 147674093 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0704887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCCC CTATGACTGC CATTGCCGAA AAAGTGCTGT TTCACAAAAC TTATCTTCAC CCGACAAGTC AGGAGTGGGT GGTGTTCGTT CATGGTGCGG GGGGCAGCTC ATCCATATGG TTCAAGCAGA TCAAAGCGTA TCGGCAGCAT TTCAATTTAT TGCTGATTGA TTTGCGCGGC CATGGGAAAT CCAATCAGTT ACTCAGAGAC TGGATTGCCA ATCGCTATAC GTTTAAGACT GTGACGCTGG ATGTGCTGAA AGTGCTTGAT CACTTGAAAA TCCAGTCGGC GCATTTTGTG GGCATGTCGC TGGGTACCAT CATAGTGCGT AACCTTGCTG AGCTTGCCAC GCATCGGGTC AATTCTATGG TGCTTGGTGG CGCGGTCACA CGACTTAATG CGCGTTCGCA AGTGTTGGTT AAGCTAGGAC ATTTGAGTAA GCACCTCATC CCGTACATGT GGCTGTATCG TTTATTTGCT TACATAGTGA TGCCGCAGCG TAGTCAAAAA GAGTCTCGCC ATCTGTTTAT TCGTGAAGCG CAAAAGCTCT GTCAGAAAGA ATTTAAACGT TGGTTTACGT TAACCGCTGA GGTGAATCCG CTGATGCGTT ATTTCCGCGA CCGTGAATTG CCGATCCCAA CCTTATATTT GATGGGAGAG AAGGACTACA TGTTCATCCA TCCTGTGAAA GAGATGGTGG CGCTCCACGC ACAAAGTGAG CTGTATGAAA TCCCAAACTG CGGTCATGTA TGTAATGTCG AGCAGCCTGA GCTGTTTAAT CAGCGTTCTA TCGAGTTTAT CCAGCGCCAA ATCCGTTAA
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Protein sequence | MSSPMTAIAE KVLFHKTYLH PTSQEWVVFV HGAGGSSSIW FKQIKAYRQH FNLLLIDLRG HGKSNQLLRD WIANRYTFKT VTLDVLKVLD HLKIQSAHFV GMSLGTIIVR NLAELATHRV NSMVLGGAVT RLNARSQVLV KLGHLSKHLI PYMWLYRLFA YIVMPQRSQK ESRHLFIREA QKLCQKEFKR WFTLTAEVNP LMRYFRDREL PIPTLYLMGE KDYMFIHPVK EMVALHAQSE LYEIPNCGHV CNVEQPELFN QRSIEFIQRQ IR
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