| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1274 |
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| Symbol | |
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| ID | 5135074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1352861 |
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| End bp | 1354207 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532732 |
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| Product | putative sodium-dependent transporter |
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| Protein accession | YP_001217218 |
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| Protein GI | 147674860 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTAGCAA ATATGGCAAG TGGTTCTAGA GGTCAGTTCA CCTCTCGATT TGGATTTATT
ATGGCTGCAG CGGGTTCTGC GGTGGGGCTT GGCAATGTGT GGGGCTTCCC AACTCAAGCT
GCCAGTAATG GTGGTGCCGT TTTCCTTTTG GTTTATCTCT GTATGGTCTT TCTTCTCGCT
TACCCGATGT TGGTGGCGGA GTTAACCATT GGGCGTTATG GTCAATCTAA CCCGATACGT
GCATTTCGCT CTGTTTGGCC GCAAGGCAAA TGGGGTGCGA TTTTGCTTGG TGTTATCGGC
ATGGTCGTGG TGTCACTTAT CCTTAGCTTT TACGCCATCG TCGCAGGCTG GCTAGTTGGC
TCCCTGTTTG GTAGTGGCTT AACGCTGATT GGTGCCGACA GTGCAAGTCA GTGGCTAACC
TCGTTCAGTA CTGAGCGAAA TCTCATTCTG ATGGTGTCAT TCATGGTATT GACCATGTTT
GTGGTGCGTA ACGGTGTCGC TAACGGGATT GAAAAATGGT CTACCCGTTT AATGCCACTG
CTATTTGTTT TGTTTGGTTT ACTGACGGTG TACATCTTCA CTCAAGAGGG TGCTCTGGAT
GGACTCAAAA TGTATCTGGT ACCAGATTTG AGCCACTTTA CGCCTGATGT TGTGGTTAGC
GCGATGGGCC AAGCCTTCTT CTCGCTGTCA CTGGGTGTAT GCGTGATGAC CACTTATGGC
TCATACCTCA ACAAAGAAGC AAATTTGCCG AAAACCGCAG CACAAGTGGC TTTGATTGAT
ACTGGTGTCG CCTTCATTGC TGGCTTGATG GTACTGCCTG CCATGTTTGT TGCGAAACAC
AACGGTGTGG AGATTTTCTC TCCATCCGGT GAGTTACTCA ATTCTGATAC CTTAGTCTTT
ACCGTGTTAC CTGCGATGTT TGACACCATG GGGGCGGTAG GTGCTGTGAT TGGTATTATC
TTCTTCCTTT TGATGATCAT TGCCGCATTG ACTTCTTCAA TATCTATGTT GGAAGTGCCC
GTCGCTTGCG CAGTGGAAGA GTTACAGCAG AAACGATCTA GTGCGGTGTT ATGGATTGGC
GGTTTGGTCA CGATCATTTC CGGTGTGATT GTGCTGAATT TTTCCAGCTT GTTTGGTTTA
GTGATTAATT TCACCACGGT TTACTCGCAA CCGATCATCG CACTTTTAAT TACCTTGATT
GCGGGTTGGA TTTGGAATCG TAACCAGATC CTATCGGAGC TGAAACAAGG CTGCCCTGAC
ATTGAAAACA GCCTATTTTG GAAAATCTGG CCTTGGTATG TGCGTCTTGT CTGCCCGGTT
CTGATGTTGA TGGTATTTTT TGCTTAA
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| Protein sequence | MVANMASGSR GQFTSRFGFI MAAAGSAVGL GNVWGFPTQA ASNGGAVFLL VYLCMVFLLA
YPMLVAELTI GRYGQSNPIR AFRSVWPQGK WGAILLGVIG MVVVSLILSF YAIVAGWLVG
SLFGSGLTLI GADSASQWLT SFSTERNLIL MVSFMVLTMF VVRNGVANGI EKWSTRLMPL
LFVLFGLLTV YIFTQEGALD GLKMYLVPDL SHFTPDVVVS AMGQAFFSLS LGVCVMTTYG
SYLNKEANLP KTAAQVALID TGVAFIAGLM VLPAMFVAKH NGVEIFSPSG ELLNSDTLVF
TVLPAMFDTM GAVGAVIGII FFLLMIIAAL TSSISMLEVP VACAVEELQQ KRSSAVLWIG
GLVTIISGVI VLNFSSLFGL VINFTTVYSQ PIIALLITLI AGWIWNRNQI LSELKQGCPD
IENSLFWKIW PWYVRLVCPV LMLMVFFA
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