Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1261 |
Symbol | |
ID | 5135178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1340835 |
End bp | 1341698 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640532719 |
Product | hypothetical protein |
Protein accession | YP_001217205 |
Protein GI | 147675291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.647772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACTC GTTTTCCTGC TGAATTGCTG CTTGTTGTGA CCACCCTATT AGCTGCGGGA GGCTGGGTTT TCTCGAAGCA AGCGATTCAA GAATTGCCCC CGTTTGGCTT TATTGGCTTA CGCTTTATCG CGGCCTCGCT TTGTTTGTTG CCATTTTGCT TGAATGCGTT GAAACAAGCC TCACGGCAAG CGTGTTTACA ATCGATGGGG GTCGGGGTTT TACTCGCCGC GTCACTTTTT TGTTGGATCC ATGCCATTTC AATCAGTGAT ACCTTGGGTG AGGGCGCGTT TATCATGAGC CTCTCTATGT TGTTTGTACC GCTATTGGCA TGGCCGATTT TCGGACAGCG ACCGATTCGT GCCTTTTGGC TTTCACTGCC CGTGGCGGTC GTGGGACTAT TCTTGTTGGC ATGGAATGGC ACTTGGCAAT TTGCCGCGAA TCAGTTGTGG TTTTTAGCGG CCTCATGTTG TTTGGCGCTG CATTTTAACT TCAATAGCCG TTTCTCAAGC CAGCTTCCGC CTATGTTATT GACGACCTTA CAATTGTTTA CTGCAGGCTG TTTGGGTATC ACGTTATCTT GGTTAACTGA AAGTTGGCCT GCGACCATCA GTCTAGTGAC CTGGAAGTGG TTTGCATTGA GTGTGTTACT GGCCACTAGC TTGCGTTATT TAATGCAAAC CATGGGACAA AAGAGTGCCA ATCCGACGAA TGCGGCGCTA CTGATGCTGT TGGAGCCGGT GTGGACGTTA GTGTTAAGCG TGGTGATTTA CCAAGAAACC ATGCCATTTA ACAAAATGTT GGGCTGTGGA TTTCTGTTAG CCTCTTTGCT GTTGTATCGA GTCAGCTTGC TGCGTTTGCG ATAA
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Protein sequence | MRTRFPAELL LVVTTLLAAG GWVFSKQAIQ ELPPFGFIGL RFIAASLCLL PFCLNALKQA SRQACLQSMG VGVLLAASLF CWIHAISISD TLGEGAFIMS LSMLFVPLLA WPIFGQRPIR AFWLSLPVAV VGLFLLAWNG TWQFAANQLW FLAASCCLAL HFNFNSRFSS QLPPMLLTTL QLFTAGCLGI TLSWLTESWP ATISLVTWKW FALSVLLATS LRYLMQTMGQ KSANPTNAAL LMLLEPVWTL VLSVVIYQET MPFNKMLGCG FLLASLLLYR VSLLRLR
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