Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1215 |
Symbol | |
ID | 5137378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1278800 |
End bp | 1279249 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640532673 |
Product | hypothetical protein |
Protein accession | YP_001217159 |
Protein GI | 147674760 |
COG category | [R] General function prediction only |
COG ID | [COG0645] Predicted kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.236602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGATAG CAAAATGCAA CGAACCTCAA TCTAAGTTAG TATCTCTCGG CACAATTGAC TACTGTGAAT CAAGTATGCG ACCTCATTTA ACCCTTATTC GCGGTTTGCC AGGTTCGGGG AAATCAACCT TGGCGAAGAC CTTGTCTGCT GTCCATCTGG AAGCAGACAT GTATTTTGTT AATCCACAAG GTGAGTACCA TTTTCGCCCC GAACACTTGG CGCAAGCCCA TGAATGGTGT CAACAACAGA CGGAATACTG GCTGCAACAA GGCAAAGACG TGGTGGTATC GAATACTTTT GTTCGGCATT GGGAGATGGC GGTATACCGA AAACTTGCCC GACAATATCG AGCTAAGCTG ACGATTCTGG TGTGTCGAGA GCGTTATCAA AACGTGCATG GGGTGGATGA AGCCACTGTC GAACGCATGC GTCAACAGTG GCAAGAGTAG
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Protein sequence | MSIAKCNEPQ SKLVSLGTID YCESSMRPHL TLIRGLPGSG KSTLAKTLSA VHLEADMYFV NPQGEYHFRP EHLAQAHEWC QQQTEYWLQQ GKDVVVSNTF VRHWEMAVYR KLARQYRAKL TILVCRERYQ NVHGVDEATV ERMRQQWQE
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