Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1189 |
Symbol | |
ID | 5137615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1252094 |
End bp | 1252534 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640532647 |
Product | hypothetical protein |
Protein accession | YP_001217135 |
Protein GI | 147674362 |
COG category | [S] Function unknown |
COG ID | [COG3059] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.932269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACGACT CGAAAACGCA CAACCTAACA ACTCAATACA GCTATCTTAT CGGTGTGTTG GGGGTATCAC TGATCTTGAT TTGGTTGGGG ATTTACAAAT TTACCCCCAC CGAAGCCAAA TTAATCGAGC CTTTGGTACT TAACCACCCC TTGATGGGCT GGACTTACCA ATTTCTCTCC GTACAAGCGG TTTCTAACCT AATTGGTGCG ACAGAAATAA TAGTAGGGAT TGGTTTATTG ATTGGATTAC GCTCTTCTAA AGTAGCTTAT TACTCTGGCA TTGCGAGCGT GGTGATTTTT ATTAGCACTT TAAGTTTTCT GATCACAACG CCTGATACTT GGAAGGTATC GGATGGGATT TTGGTTCCAA ACTTCTTTTT ATTGAAAGAT ATTCTCTTTT TAGCGGTAGC GATTCACGTT ATTGAGAAAA ATAAAGTGTA G
|
Protein sequence | MHDSKTHNLT TQYSYLIGVL GVSLILIWLG IYKFTPTEAK LIEPLVLNHP LMGWTYQFLS VQAVSNLIGA TEIIVGIGLL IGLRSSKVAY YSGIASVVIF ISTLSFLITT PDTWKVSDGI LVPNFFLLKD ILFLAVAIHV IEKNKV
|
| |