Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1054 |
Symbol | |
ID | 5135483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1098654 |
End bp | 1099871 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640532512 |
Product | hypothetical protein |
Protein accession | YP_001217000 |
Protein GI | 147674313 |
COG category | [S] Function unknown |
COG ID | [COG3287] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCATCTC ACGTATACAA AACTCGTTCA ATGCGGCTAA AAACAACCGT TTCTACTCAA GTTGATGTCT ATTCTTGTAT CCATGAACTA CAACAGTCTA TGGATAGCAA TGGTTTATCG AATTTAATCT GCTATTTCAC TGAAGAATAC GATGCTCAAC TTTTATCCTC AATGTTAAAA GCGGCATTTC CCGGCATTCC AATTATCGGA TGTTCTTCCT GTCGTGGTGT GATGACGCAA GATGGGTATT TTTCCAATCC GGCAGTGGGA ATCATGGGGA TTTATGATAG TCCTCAGGCT GCTTACGGCA CGGCATTGAT CTCTCTTTGC GATAATCGCC CCATCCCTGA GTTAATTGAT CAAGCGATTG ATAATGCACT AGAAAGTGCC GATAGAACGG GAGAGTTACC TAGTCTTGTG CTTTTGCATG CTACACCCGG TATTGAAGAA GTTTTGATTG AAGGAATCGA TAACAAGTTT GGCTCTCAAG TCCCCATTAT TGGCGGGAGT GCTGCGGATA ATTTCATCAG TCAAAATTGG TCTATCTTCA CGCAGGAAGG TGCTACCGAT AAAGGTATTG CATTGCAACT GATGTTTCCA TCGCAGTCGG TTTTTGGTGG ATTCAGCGCA GGATATTCTC CAACTGAATT TTCTGGTGTG ATCACGAAAG CCAAAGGTCG AGTGATTGAG GAAATTGATA ACGAATCGGC CAGTGGACTT TATAAAGAGT GGATTGGGGA TCACTCGGGA ATTCAAATCA CGGAACAGTA CCTTTTCGAA CATGTGACTC GGTTTCCTTT AGGGAGAGTG GTGGGAAAGG AGGAGAGCTG TTCACCTCAA TATAAGCTTA CTCACCCCGT GAGAAGGACT GAAAATGGCG GGCTAGAAAT GTTTGCGAAT GTGGAAGTCG GAGAGCAAGT AAGCTTGATG ACGGGATCGC AAAATCAGCT TATTGAACGT GTGACGCGCG TTATTCAGGA AGCGAGTTAT AAAAGTTATC AAGATCGGGC GTTATTTGGT TCTTTAACTA TATTCTGTGC TGGTTCCATG TTGAGGCTTG GTCAAGATAT ACATAAGGTT CAACAGAAAA TAATGGAGCA GCTCAATGGT TGCGCTTTTA TTTGTCCCTT CACTTTTGGA GAGCAAGGCC GTTTTATTAA TGGTGAAAAT GCGCACGGTA ACTTAATGAT TTCTTCTATT GTATTTTATG AGGCATGA
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Protein sequence | MSSHVYKTRS MRLKTTVSTQ VDVYSCIHEL QQSMDSNGLS NLICYFTEEY DAQLLSSMLK AAFPGIPIIG CSSCRGVMTQ DGYFSNPAVG IMGIYDSPQA AYGTALISLC DNRPIPELID QAIDNALESA DRTGELPSLV LLHATPGIEE VLIEGIDNKF GSQVPIIGGS AADNFISQNW SIFTQEGATD KGIALQLMFP SQSVFGGFSA GYSPTEFSGV ITKAKGRVIE EIDNESASGL YKEWIGDHSG IQITEQYLFE HVTRFPLGRV VGKEESCSPQ YKLTHPVRRT ENGGLEMFAN VEVGEQVSLM TGSQNQLIER VTRVIQEASY KSYQDRALFG SLTIFCAGSM LRLGQDIHKV QQKIMEQLNG CAFICPFTFG EQGRFINGEN AHGNLMISSI VFYEA
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