Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0625 |
Symbol | |
ID | 5135361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 667068 |
End bp | 667697 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640532083 |
Product | SecA, C-motif-containing protein |
Protein accession | YP_001216575 |
Protein GI | 147674463 |
COG category | [R] General function prediction only |
COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0113543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTTCTA TGAATTATTC CCTGATCGAT CTCAGCGCGA TTGAATGCCC TGAGTCGGAT CTGTTTATTG AAGGTGTGGT GCTCGCCGCT AATTTTGCGA CTCGTCCGCT CGATCCTGAG CAGTGGCTAC CCGAGCTGTT TGTCGAGCAA CATCAGGCGC TATTACAACC GGTGACCGAG CAAATTCATC TCCAATACCA GCAACTTAAA GGCAATGGGT ACGATTTGTT GACGCTGTTG AATGAGCATG CACCCTCGCG TGAGCAAGGT TTGGCAGATT TTTCGGAAGG CTTTATGCAA TTATGGCCGC AAGTTGAACC CATGTGGCAG CAAGGCGCAT TTGCAGATGG TTCGATCCGC ATGCTGCAAG CATTATTGAC CACCTTGATG TTGGCGATTG ATGAAGCGCA AACCCAAGCG CAAATGCGCG AAGCGGGCTA TGAACAAGTT CCTGCGCTCG CCGATTTGAT CGAGCAACTG AATTTAATGG TGCACGAAGT CGCGCTTGCG GCGGATGAAG CCATGCTCGG CGCTAAAGCA CAAAGTGTGA ATCCGTTTAA AGGCATTGGC CGCAATGATG CTTGCCCTTG CGACAGCGGT AAAAAATTCA AACAGTGTTG TGGGCAATAG
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Protein sequence | MFSMNYSLID LSAIECPESD LFIEGVVLAA NFATRPLDPE QWLPELFVEQ HQALLQPVTE QIHLQYQQLK GNGYDLLTLL NEHAPSREQG LADFSEGFMQ LWPQVEPMWQ QGAFADGSIR MLQALLTTLM LAIDEAQTQA QMREAGYEQV PALADLIEQL NLMVHEVALA ADEAMLGAKA QSVNPFKGIG RNDACPCDSG KKFKQCCGQ
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