Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0602 |
Symbol | |
ID | 5135471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 640120 |
End bp | 640704 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640532060 |
Product | hypothetical protein |
Protein accession | YP_001216552 |
Protein GI | 147673821 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTG TACTTTCCGC AGATCACAAA GACGCATTGC AGGAATTCAT GAACATCTCT ATGGGTCGAG CCGCCAGTAA GCTTGCGACC TTGCTTAATT TGCACGTCAC CATCTCCGTT CCCAACATTC GGGTCGCGAC AGAGGAAGAT ATGCGTGCGC TGCAGTCTTA TGCCGCTGAT TATTATTACA CCCGACAATC TTTCTACGGC GGAATGGATG GAGAGCTGAT CACCTTAATG AGCCGTTGCG GTTGTGAGCA AGTGGTCAAT GACCTTAACC ATTCGAAAGG TATGGCGGAT GGATTAGTCA GTATTGAAGA GAGCATTTTG GATATCTCCA ACATCCTTTC TGGGGCGAGT TTAAAAGGTC TATGTCAACA GATTGAATTG AAAACCAAAA TTCAACCACC AGTCATCTTT GATCCGACCC ATCAGCCTTT GCCAATTTTG CAATGGCGTC TGTCTTTGAT TATGGAAATC AATTTTCTGG TTGAGAAGGC CTCTTTTTCT GCCAAAACCA TCATCTGTTT TGCTGATAAA GAGTTAGATA AGGTATTTGC CCATCTCGAC GAACTCTTGA TGTAA
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Protein sequence | MSIVLSADHK DALQEFMNIS MGRAASKLAT LLNLHVTISV PNIRVATEED MRALQSYAAD YYYTRQSFYG GMDGELITLM SRCGCEQVVN DLNHSKGMAD GLVSIEESIL DISNILSGAS LKGLCQQIEL KTKIQPPVIF DPTHQPLPIL QWRLSLIMEI NFLVEKASFS AKTIICFADK ELDKVFAHLD ELLM
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