Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0598 |
Symbol | |
ID | 5137432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 636984 |
End bp | 637973 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640532056 |
Product | hypothetical protein |
Protein accession | YP_001216548 |
Protein GI | 147673908 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAACC ACGGAGATTT TTTGTTGAAT ACCCAACAGC TTTCAGCGAT GACACCTGCT GATATTGAAT GCGCAGCTCA GTTACTTAAG CAAGGCCAAC TGGTTGCGAT ACCGACCGAA ACCGTTTATG GACTGGCGGC CGATGCCACC CAACCTGAAG CGGTGAAGCA GATTTTTAGT GCCAAAGGTC GCCCAGCGAA TCATCCGTTG ATCGTCCATC TCGGGTCGGC AGAACAACTC TCTGAATGGG CGACCGATAT TGCGCCAGAA GCGTATCAAC TTGCCGAAGC TTTTTGGCCG GGGCCTTTGA CGCTCTTGCT CCCCAAAGCC AAGCAGGTTT CACCTGTTGT GACTGGCGGT TTAGAATCGG TCGGCATTCG TGTTCCCGCT CATCCTGTCT TGCTGGATAT TTTGAAGACG CATCGCTTAG CGGTGGCGGC ACCTTCGGCC AACCCCTACA AAAAACTCAG CCCAACCTCA GCCCAGCAGG TGCTTGATGG TTTGAATGGC AGACTCGCCG CAGTCTTGGA TGGCGGTGAA TGCCAACACG GTTTGGAATC CACGATTGTC GATTTAACCA GCAAACCTTT TCGTGTACTG CGCGCAGGCC CGATAACGGC CAGTGAACTT AGCGCGGTAT TGGGTCAAGA AGTACTGCAG CCACAAGTTC ATCAAGTTGC GGTGCCGGGA AATGTCGATA GCCACTATCA ACCGAAAACG CGCCTACGGG TGATTGATGA CCTAGCCCGT GAGCTTGCCA CTCAATCGGA TGAGCTTCGC ATCGCGCTAC TTAATCTCTC TGCGCTGCAA GCCAGCGAGC AGCGTTTACT CAAGCCGATG CCGCAAGAAG CCAAAGCCTA CGGCCAAGCC TTGTACCGCT CTCTGGCCGA AGTGGATAAA TGGGGCGTAG ATGAAATTTG GTTAGAGCGT CCACCACAAG GTGAAGCGTG GCTTGCCGTG CATGATCGGC TGCGTCGCGC AGCCAGCTAA
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Protein sequence | MPNHGDFLLN TQQLSAMTPA DIECAAQLLK QGQLVAIPTE TVYGLAADAT QPEAVKQIFS AKGRPANHPL IVHLGSAEQL SEWATDIAPE AYQLAEAFWP GPLTLLLPKA KQVSPVVTGG LESVGIRVPA HPVLLDILKT HRLAVAAPSA NPYKKLSPTS AQQVLDGLNG RLAAVLDGGE CQHGLESTIV DLTSKPFRVL RAGPITASEL SAVLGQEVLQ PQVHQVAVPG NVDSHYQPKT RLRVIDDLAR ELATQSDELR IALLNLSALQ ASEQRLLKPM PQEAKAYGQA LYRSLAEVDK WGVDEIWLER PPQGEAWLAV HDRLRRAAS
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