| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0595 |
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| Symbol | |
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| ID | 5135402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 635395 |
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| End bp | 636183 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532053 |
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| Product | AraC/XylS family transcriptional regulator |
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| Protein accession | YP_001216545 |
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| Protein GI | 147675685 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG TGATCGTGCA GACTGGGCAG TTTAAAGGTT TGCGTAAACA GCCTCTGCAT
AATGTCTTGA TCTATGCGCC CACCATTATT TGGGTAACAC ATGGAAATAA ACAGCTCTGG
TGGCATGACA CGACGCTCAA TTTTCATTCT GCTGATTGGC TGATGTTGCC AGCCAATCAG
TATCTTACCT TTGTGAATGT ACCGCAGCAG GCGCAGTTTT ATTCACGCAC CTTGACCTTA
CATGAAGCGC CACCTGTAGA GTGGATAACT CAATCAAGTC AATATGAGCG AAATGAACAA
CCTAGAGTGA GAGTGACGGC TGAGCTGGCC TACTGTTTTG AGCTGCTTTA CGAGATGAAC
CAACAATCGC TCAGTGAAGA GACACAGCGC CAGTTTGTGC TGGGTTTTTA CGCGCAGCTG
CGGGATGAGA AAGCGCTACA TCTCCTATTT CCAAGCGATA ATGCCTCAAT GCGAGAGCGT
TTAGCGCGTT ATTTAAGTGT TAATCCCGGT GATGAACACA ATATTGAAAC GGTTTCGGCG
CATTTTGCGA TGAGTCGAGC GACCTTGGCT CGACATTTGG CAGCGGAAGG TACGGGTTTT
CGAGAAGTGC TCAGTGAAGT GCGGATGAAC TACGCGCTTG CGCTGCTACA AGAGCTACGT
CCTTTGATGG AGGTCGCGGT GGCTTGTGGG TATCAATCAT TGACTCGATT TTCGGCGCGC
TTTAAGCAGC AGTATCGGCT TACGCCTTAT CAGTATTTAC AAACCATTAC GGATAAGCCG
GAAAAATAA
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| Protein sequence | MSKVIVQTGQ FKGLRKQPLH NVLIYAPTII WVTHGNKQLW WHDTTLNFHS ADWLMLPANQ
YLTFVNVPQQ AQFYSRTLTL HEAPPVEWIT QSSQYERNEQ PRVRVTAELA YCFELLYEMN
QQSLSEETQR QFVLGFYAQL RDEKALHLLF PSDNASMRER LARYLSVNPG DEHNIETVSA
HFAMSRATLA RHLAAEGTGF REVLSEVRMN YALALLQELR PLMEVAVACG YQSLTRFSAR
FKQQYRLTPY QYLQTITDKP EK
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