| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0473 |
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| Symbol | mrdA |
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| ID | 5135724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 504926 |
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| End bp | 506842 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531931 |
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| Product | penicillin-binding protein 2 |
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| Protein accession | YP_001216424 |
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| Protein GI | 147674454 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0538731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACGCC AGCATACCCC TATCCGCGAC CATCAAGCCG AGACGCATCT GTTTCGTAAT
CGTGCCATCG TCTCTTTTGT CGGGATCTTG ATCTGCATGG GTCTGCTGGT GACCAACTTG
TACAATATTC AGATCAACCA ATATCAAGAC TACAAAACGC GATCCAACGA TAACCGCATC
AAAGTCGTTC CGATTGCGCC TAACCGCGGG CTGATTTTTG ACCGTAACGG TGTGCTTCTG
GCGGAAAACC GTCCGGTATT CAACTTAGAA GTGATCCCAG AAAAAGTGCC AAATATGGAA
GAGACCATTG CGCGCTTGCA ACAACTCATT GAGATCAGCC CAGAAAAGCT TGCCGCCTTT
GAAAAGGAAC GCAAACAGAC TCGCCGCTTT AATTCTGTAC CGCTGCTGAC TCAGCTTACC
GACGATGAAG TGGCGAAGTT TTCCGTTAAT CAACATAAAT TCCCCGGCGT TTCGGTCACC
GCTAACCTCA AACGCTATTA CCCCTATGGC GAAGTGCTGA CCCACGTGAT TGGTTACGTA
TCGCGGATTA ACGATAAAGA TCTCGAACGC TTGGACAAAG AAGGTAAAAA AGCCAACTAC
CAAGCTACCC GAGATATCGG CAAACTGGGG ATTGAACGCT ACTACGAAGA CTTACTGCAC
GGTACCGCCG GTTATCAGGA AGTCGAAGTC AACAGCCGTG GCCGTGTCAT TCGCACCCTA
AAATACGTCC CTCCCATTCC GGGAAAAGAT ATCGTGCTCA ATCTCGATAT CGAACTTCAG
CTCTATGCCT ACAAGCTGCT CAAAGGTCGC CGAGGCTCGA TTGTCGCTCT TGATCCTAAA
GATAATGGCG TGCTCGCCAT GGCATCGAGC CCAAGTTACG ATCCCAATGC ATTCGTGCAT
GGTATTTCAG GTAAAGCCTA CAGCGATTTA CTCAATGACA AACGTCGCCC ATTAGTAAAC
CGCACCACGC TTGGCATTTA TCCGCCGGGG TCAACCGTCA AACCGTTTAT TGCGGTGTCC
GCACTGCAAG ATGGGATCAT TACACCTAAT ACTACCCGTA ATGATCCGGG TTACTGGCGC
ATTCCCAATA CCGATACTCG GCCTTTCCGC GACTGGCTAC GTTGGGGCCA CGGCCGGGTA
GACATCATTA AATCTCTCGA AGAATCGGTA GATACCTTCT TCTATCAAAT CGCCTATGAC
ATGGGCATAG ATAAACTCTC CAGTTGGATG ATGCGCTTTG GCTTTGGGGA TCTGACGGGG
ATTGATATTT ACGAAGAGAG TAAAGCCAAT ATGCCAACAC GCGAGTGGAA AATGGCACGT
CACAAAGTGC CTTGGTATCA AGGTGACACC ATTCCGGTTG GGATTGGACA AGGCTATTGG
ACTGCCACAC CGATGCAAAT TGCCAAAGCG ACATCGGTTT TAGTTAACCA CGGTAAAGTG
ATTGCCCCGC ATCTGCTGCG TGCCACCATA GATAACGGTG AACAGTTCTC AACCCAAAAA
GAGACCGAGT ACACCACTTA CCCGCCGATT GATGGCGTGC CGAAAAAGTA TTGGGACATG
GCTATCCATG GCATGTATCT GGTTAACCAT GGTGCTAAAG GAACCGCACG TCGCGCCTTC
CAGAATATGC CTTACGAAAG TGCGGGTAAA TCAGGGACAG CGCAAGTATT TGGTCTGGCG
GAAGGCCAAA AGTATAACGC AAGTGAGTTA GCAGAGCACT TACATGACCA TGCTCTGTTT
ACAAGTTTTG CCCCTGTCAA AGATCCCAAA GTTATCGTCA CCTTCGTATT GGAAAATGGC
GGCGGCGGCT CCAGTAATGG TGCGCCAGTC GTACGACAAA TTTTCGATCA CGTGATTTTG
GGCAAAAAAG AAGAAGAGCC AAAAGCAGAA TCAAAAGAAG AGGTAATACA GCCATGA
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| Protein sequence | MLRQHTPIRD HQAETHLFRN RAIVSFVGIL ICMGLLVTNL YNIQINQYQD YKTRSNDNRI
KVVPIAPNRG LIFDRNGVLL AENRPVFNLE VIPEKVPNME ETIARLQQLI EISPEKLAAF
EKERKQTRRF NSVPLLTQLT DDEVAKFSVN QHKFPGVSVT ANLKRYYPYG EVLTHVIGYV
SRINDKDLER LDKEGKKANY QATRDIGKLG IERYYEDLLH GTAGYQEVEV NSRGRVIRTL
KYVPPIPGKD IVLNLDIELQ LYAYKLLKGR RGSIVALDPK DNGVLAMASS PSYDPNAFVH
GISGKAYSDL LNDKRRPLVN RTTLGIYPPG STVKPFIAVS ALQDGIITPN TTRNDPGYWR
IPNTDTRPFR DWLRWGHGRV DIIKSLEESV DTFFYQIAYD MGIDKLSSWM MRFGFGDLTG
IDIYEESKAN MPTREWKMAR HKVPWYQGDT IPVGIGQGYW TATPMQIAKA TSVLVNHGKV
IAPHLLRATI DNGEQFSTQK ETEYTTYPPI DGVPKKYWDM AIHGMYLVNH GAKGTARRAF
QNMPYESAGK SGTAQVFGLA EGQKYNASEL AEHLHDHALF TSFAPVKDPK VIVTFVLENG
GGGSSNGAPV VRQIFDHVIL GKKEEEPKAE SKEEVIQP
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