Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0461 |
Symbol | |
ID | 5137575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 493201 |
End bp | 495414 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640531919 |
Product | putative exopolysaccharide biosynthesis protein |
Protein accession | YP_001216412 |
Protein GI | 147674262 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0489] ATPases involved in chromosome partitioning [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGCA AACAATTCAC TCAAGAAGAA GTGATCGATA TTCGTCAGTA TTTTAATGTG CTACTTAACT ATAAGTGGCG CATCTTACTT TTCTCCGTGA TGGTGACGGC GATCACCTTA CTGTTCGTAC TCTCAATGCG CTCAGAATAC ACAGCGCGTG CGACTATTTT GATTGAATCG ACGCAAGCGA AAGCGGTATC CATTGAAGAA GTGTATGGGC TCGATACCAA AAGTCAGGAG TATTACCTGA CCCAAATTGA GATCCTCAAA TCCGACACGA TCGCTCAAGA AGTCATTGAA CGACTTGATT TAGCCTCCGA TCCAGAATTC GACTTAAGCC CAGAGAGCGA CGCTTCTCCA AGCTTAAAAG AACGCTTGGT AGAGTGGATG CCATTCCTAC AGGGATTTAA GCAGGAAGAG ACCGTCGCCG ATCCTGATTT GGAAGCGTAT CGCCAAAATC GACTGATCTT GTATAAGTTC AAACGCGGAA TGGAGATTAG CCCGATCCGC AAAACCCAGT TGGTGAATAT CTACTACACC GCAGGTGATC CTAAGTTGGC GGCGAAAATC GCGAATGAGA TTGCGCGGGT GTATATGGAC AGCCATTTGG AAGCCAAGTT AGAGGTAGAG CTAAAGGCGA ATACTTGGCT AAATACCCGT ATGGAAGAGC TACGTACTCA ATTACGAGAA TCGGAAGCTA AGTTACAAGC GTTTTTGCAA GCGGAAGGCT TGGTTGATGT GCAAGGTGTT GAAGGGCTAG CAACGCAAGA GTTGGAAGAG CTGACTTCGC AGATGAACAA AGCGCGTGAT CGCCGCGTGG CCGCGGAAAC CCTGTATCAA GTGGCGAACA GCTACAGTAA AAATGACAGT GACTTGACGG CTTTGTCGTC GATTCCTGAA ATTTCCAATC ACCCAACCAT CCGTGATTTG AAAGTCGCTG AAGTGGATGC TGAGCGGAAA GTCTCTGAGT TTTCTAAGCG TTACGGCCCT AAACACCCGA AATTGAAATC GGCATCAGCA CAGTTAGAAG CGGTGCGTAA AAATCTGCGT GCAGAGCTGA GACAGCTGTT AAATGGTATC AATAACGAGC TGCAAGCGGC CAAACAGTCT GAGCGGTCAT TACAAACGGA ATTTAATCAG CGTAAATCTG AGTTCCAGAC CCTGACGGTA AAAAATGCTA AGTATTCTGA GCTGAAGCGC GAAGTACAAA CTAACCGTGA ATTGTTTGAC CTGTTTTTAG CGCGTCAAAA AGAGACCAGT GCTTCGGGGG ATTTTAATAC CACGATCGCT CGCTTTACTG ACCAAGCCAG TGCACCATTA ACGCCGAGTA AACCCAATAA AAAATTGATT GTATTGCTTG CCTTTGTGGT GTCGTTTGGT TTTGCTTGTG TAGTGGCGTT TATCGCTGAT GCGATGACTG ATACCTTTGC CGACATCAAA CAGGTCGAGA AACAGCTGGC ACTGAGTTTA TTGGGCGTTG TTCCTGTGGT GCGTAAACAG CGTGGCAAAC TGGATGCGAA AGCCTATTTT GATGAGAAAC TGCGTGAGCT AACCGAAGCG GTGCGTACGA TACGGACCAG CTATTTGCTT GCGCATGTCA ATCAAGATCA GCATGTCGTG ATGCTCACAT CTTGTCTGCC CGGAGAGGGA AAGACGACAT CTAGCCTGAA CTTGGCCTTG TCGTTGGCGC AAATGGAAAA AACCTTGCTG ATTGACTGTG ATTTACGCAA ACCGGCGATT GCGCACCGTT TTGGCATTTC TGGCTCACAA CCGGGCGTCA CCAATTTACT CAATGGCACG CAAAGCTTAG AAGATTGCGT CTACCATGAT GAGCAATCCG GGCTCGATAT TCTCACTGCG GGTGTTTATG CCTCCAACCC GTTAGAGCTG CTCTCTTCAA GCAAATTTAG TGAACTGTTG GCCGATTTAC GTACTCGCTA TCAACGCATT GTGATTGATA CACCACCCTG TCTCGCAGTG AGCGATAGCT TTATGTTGGC GCAATACGTG GACTCGGTGA TTTTGGTGAT TGATGCCAAC CATACTCGAA CGCCAGTCGT GCGGGAAGTG GTGGGTAAAT TGACTCAGCA GGGCAGTCGT ATTGATGGTG TGATACTCAA TCGTCTTAAT GCGAAAAAGG CTTCACGCTA CAGCGGCTAT TATCACTACC AAGCTTACTA TGGCGAAGAG ACGAAATCGG GCGCGGCAAA GTGA
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Protein sequence | MTGKQFTQEE VIDIRQYFNV LLNYKWRILL FSVMVTAITL LFVLSMRSEY TARATILIES TQAKAVSIEE VYGLDTKSQE YYLTQIEILK SDTIAQEVIE RLDLASDPEF DLSPESDASP SLKERLVEWM PFLQGFKQEE TVADPDLEAY RQNRLILYKF KRGMEISPIR KTQLVNIYYT AGDPKLAAKI ANEIARVYMD SHLEAKLEVE LKANTWLNTR MEELRTQLRE SEAKLQAFLQ AEGLVDVQGV EGLATQELEE LTSQMNKARD RRVAAETLYQ VANSYSKNDS DLTALSSIPE ISNHPTIRDL KVAEVDAERK VSEFSKRYGP KHPKLKSASA QLEAVRKNLR AELRQLLNGI NNELQAAKQS ERSLQTEFNQ RKSEFQTLTV KNAKYSELKR EVQTNRELFD LFLARQKETS ASGDFNTTIA RFTDQASAPL TPSKPNKKLI VLLAFVVSFG FACVVAFIAD AMTDTFADIK QVEKQLALSL LGVVPVVRKQ RGKLDAKAYF DEKLRELTEA VRTIRTSYLL AHVNQDQHVV MLTSCLPGEG KTTSSLNLAL SLAQMEKTLL IDCDLRKPAI AHRFGISGSQ PGVTNLLNGT QSLEDCVYHD EQSGLDILTA GVYASNPLEL LSSSKFSELL ADLRTRYQRI VIDTPPCLAV SDSFMLAQYV DSVILVIDAN HTRTPVVREV VGKLTQQGSR IDGVILNRLN AKKASRYSGY YHYQAYYGEE TKSGAAK
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