| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0321 |
|---|
| Symbol | |
|---|
| ID | 5136009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 341913 |
|---|
| End bp | 342251 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640531779 |
|---|
| Product | putative oxaloacetate decarboxylase, gamma subunit |
|---|
| Protein accession | YP_001216277 |
|---|
| Protein GI | 147673526 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3630] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit |
|---|
| TIGRFAM ID | [TIGR01195] sodium pump decarboxylases, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCGCGCT TAGCGCGCCT TTTTTTCTCT CCGTTTTCAA CCCTGTTTTT ACCACTGGAA
GTGACCATGC AATCAACCTC ACTGTTCCTC GAAGGGATTA ATTTGCTGAC GCTGGGGATG
GGCTTTGTGT TCATCTTTCT GATTTTCTTG GTGTATGCCA CGCGTGCGAT GTCGCAATTG
ATTGTGCGTT TTGCCCCGCC GGAAGTGCCA GCCAAAACCA CCAATAAAAA AGCCTCTGCC
AACAAGGCCA AAGCCAACCC AAATCAAAAC CAAGGTGAAT TGCTCGCGGT GCTCACGGCC
GCTGTCCATC ACCATAAAAC ACAACAAAAA CTATCTTAA
|
|---|
| Protein sequence | MARLARLFFS PFSTLFLPLE VTMQSTSLFL EGINLLTLGM GFVFIFLIFL VYATRAMSQL
IVRFAPPEVP AKTTNKKASA NKAKANPNQN QGELLAVLTA AVHHHKTQQK LS
|
|---|
| |