| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0027 |
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| Symbol | irgB |
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| ID | 5136935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 21880 |
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| End bp | 22776 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531487 |
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| Product | iron-regulated virulence regulatory protein IrgB |
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| Protein accession | YP_001216001 |
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| Protein GI | 147674947 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0122386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATC TCAGCGCCGT AAAAGCTTTC CATGCGCTTT GCCAACATAA GAGCCTGACT
GCCGCTGCCA AAGCGCTTGA ACAGCCTAAA TCCACCCTGA GTCGCCGTTT GGCGCAACTT
GAAGAGGACT TGGGACAAAG CTTGTTGATG CGTCAAGGCA ACCGCTTAAC GCTCACCAAA
GCAGGAGAAG TGTTTGCGGT TTACTCGGAG CAACTACTTG AACTGGCCAA TAAAAGTCAG
GAAGCGTTGC AAGAATTGAA CAATCAAGTG ACTGGCGAAC TCACGCTGGT GGTACACCCC
AATTTGATCC GCGGCTGGCT CAGCCAAGTA TTGGATGAGT TTATGCAGCA GCATTCGACA
TTGAAGATCC GTCTACTCAG CCAGTTTCAA CACAGTGATG AGGTGTTTGA GCCCGATTTG
ATCATTTGGA TTGAACACGC CGCCCCCATG GGTTATCGCA AAGAACGCTT AGGCTATTGG
CGCTATGCCA CTTACGCCTC TCCCAAATAT TTGGCCCATC GAGATAAACC GACCCATCCT
CGTGAGCTGA TTCATCACCC ATGGATTGAT TTTATTGCTT GTCGGCGCGC GGAGCTTGAA
CTGCACCATC CAGAGTTCGG CAGTTATTCA CTGCCAGCAC TAGAGAGTCG TTTACAAAGC
GATAATCTTG CCATGCAAGC CGATGCGATT GCTAAAGGTC GTGGTATTGG TTTGCTTCCC
ACTTGGTTTG CCAATGGTTT TGAAACGGCG CATCCGGGCA GCCTCATTCC TTGCGTCAAC
GGATGGCAAT CACAGCCAAC AGAAATCAAC TGCTTCTATC CGCTCGGTCG TCACCCACTT
CGGCTGCGCC TATTTATTGA TGCGCTCCGC CAAGCAAGGC CCGATGAGTG GCAATAA
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| Protein sequence | MQDLSAVKAF HALCQHKSLT AAAKALEQPK STLSRRLAQL EEDLGQSLLM RQGNRLTLTK
AGEVFAVYSE QLLELANKSQ EALQELNNQV TGELTLVVHP NLIRGWLSQV LDEFMQQHST
LKIRLLSQFQ HSDEVFEPDL IIWIEHAAPM GYRKERLGYW RYATYASPKY LAHRDKPTHP
RELIHHPWID FIACRRAELE LHHPEFGSYS LPALESRLQS DNLAMQADAI AKGRGIGLLP
TWFANGFETA HPGSLIPCVN GWQSQPTEIN CFYPLGRHPL RLRLFIDALR QARPDEWQ
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