Gene VC0395_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_1125 
Symbol 
ID5134237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp1090275 
End bp1090586 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content45% 
IMG OID640531447 
Productputative monovalent cation/H+ antiporter subunit F 
Protein accessionYP_001215961 
Protein GI147672357 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000095206 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTTGA AAAACGGATA CTGGAGGTCA CTCGTGGATA ATTCATTACC GCTGGCGATT 
CACTTCGCCT ATCTAGGACT TTTGCTTAGC TTGGCAATGG CGTTTATCCG CTTAGTGTTA
GGCCCATCGC TCGCCGATCG CGTGGTGGCT CTCGATTTAA TTTCCTTTAT CACCATAGGC
TTTATTGTCG TTTATAGCTT AGACAGTGGT CAGCAAACGC TATTGGATAT TGCCTTAACC
CTAGGCTTAG TGGCTTTCCT TGGCACCATA GCATTTGCAC GATTTATCGC TAAACGAAAA
GGAGAACTTT AA
 
Protein sequence
MVLKNGYWRS LVDNSLPLAI HFAYLGLLLS LAMAFIRLVL GPSLADRVVA LDLISFITIG 
FIVVYSLDSG QQTLLDIALT LGLVAFLGTI AFARFIAKRK GEL