Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_1016 |
Symbol | |
ID | 5133960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 994040 |
End bp | 995629 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640531338 |
Product | hypothetical protein |
Protein accession | YP_001215852 |
Protein GI | 147671475 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGATCCA TGAATTTAGC CCCTTATTCT GACTCGGTTT ACTCGGTCAT CCCACCGCTA CTCGCGGTGC TGCTCGCGAT TACCACACGC CGAGTATTAC TCTCTTTAGG CGCTGGCATT GTTGCTGGTG CGGTTATGCT TAACCATTTT TCCCCGCTGA GTACAGTACA ATACCTGTTT GGAAAGATCA GCGGTCTGTT TTGGGCGGAA GGTGCAGCCA ACAGCGATAA CATCAATATG CTGCTGTTTA TGCTGCTGCT GGGTGGTTTG ATAAGCTTAA TGACGGCCTC AGGCGCAACG CGTGCTTTCG CGGTATGGGC TGAGCGCAAA TGCAAAGATC GCCGCAGTGC AAAAGCTCTG ACGGGTTTGA TGGTATTTGC TTTTTTCATC GACGATTTTT TCCATAGCCT ATCTGTGGGT GCGATTTGCC GCCCAGTGAC GGATCGCTTC CAAATCTCGC GCGCGAAACT CGCCTATTTG CTCGACTCTA CCGCAGCCCC TGTGTGTGTG ATTACACCGA TTTCCTCTTG GGGCGCTTAC ATCATCGCTC TCATAGGCGG CATTTTAGCG GCACACGAAA TGACCGAAAT CAGTGCGATT TCAGCATTTG TACAGATGAT CCCGATGAAT CTGTACGCCG TGTTTACCCT GCTTATGGTG CTCGCGGTGA TTTTCCTGCC GATGGATATT GGTCCCATGC GCCAACACGA AGCGTGGGCT CGTGAAGGTA AATTGTGGGA CGAAAGCAAA GGCCGCCCTG CGGGCTTAGA TATGGAAGGT GGAGAAACCG CTCGCGGTAC CATGATTGAT ATGGTGTTGC CCATCGCAGT ACTGACCATC ACCACCTTGA TTTTCATGAT CCAAACCGGT AACGCCGTCT TAGCCGCTAA CGGTGAAGCG TTCTCTTTGA TTGGCGCACT CGAAAATACC AATGTGGCTC AGTCACTGGT TTATGCGGCG CTGTGTAGCT TGGCGGTCTC GATAGTTCTG TCACTGCGCT TAAAACTCTC GGCGCAAACG TGGCTATCCA CGGCACCCAA AGGGGTTATG GCGATGATGC CAGCAATCAT CATTCTGCTG TTTGCTTGGA CGATTGGTGG TGTGGTGCGC GATCTACAAA CCGGCATTTA TCTCGCGTCT CTGACTCAAG GCAATCTACC GGTTGAACTG CTCCCCGCCT TGGTGTTTGT ACTTTCTTGC TTAATGGCAT TCGCCACTGG CACCAGTTGG GGCACCTTTG GGATTATGCT GCCACTCGCG GGTGATATCG CTGCGGCATC AGACATCAGC CTAATGCTAC CGACTCTCTC CGCCGTATTG GCCGGCGCAG TGTTTGGCGA TCACGCCTCA CCGATTTCCA GCACCAGTAT CTTGTCAGCA ACCGGCGCAG GTAGCCATCA TATTGACCAT GTCGTGACTC AGCTTCCTTA CGCGATCAGC GCAGCAATGG GCGCACTACT GGGTTATTTG GCAATGGGCT TATTGCACTC CGTTTGGGCT GGTTTGGCCG CCAGCAGTGT ATGGTTTGTG CTGTTTTGTG CCTTCAACCT ACGCCAAAAA CGTTGGCAGC AAGAACCTGT TGAAGCCTAA
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Protein sequence | MRSMNLAPYS DSVYSVIPPL LAVLLAITTR RVLLSLGAGI VAGAVMLNHF SPLSTVQYLF GKISGLFWAE GAANSDNINM LLFMLLLGGL ISLMTASGAT RAFAVWAERK CKDRRSAKAL TGLMVFAFFI DDFFHSLSVG AICRPVTDRF QISRAKLAYL LDSTAAPVCV ITPISSWGAY IIALIGGILA AHEMTEISAI SAFVQMIPMN LYAVFTLLMV LAVIFLPMDI GPMRQHEAWA REGKLWDESK GRPAGLDMEG GETARGTMID MVLPIAVLTI TTLIFMIQTG NAVLAANGEA FSLIGALENT NVAQSLVYAA LCSLAVSIVL SLRLKLSAQT WLSTAPKGVM AMMPAIIILL FAWTIGGVVR DLQTGIYLAS LTQGNLPVEL LPALVFVLSC LMAFATGTSW GTFGIMLPLA GDIAAASDIS LMLPTLSAVL AGAVFGDHAS PISSTSILSA TGAGSHHIDH VVTQLPYAIS AAMGALLGYL AMGLLHSVWA GLAASSVWFV LFCAFNLRQK RWQQEPVEA
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