| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0948 |
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| Symbol | |
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| ID | 5134476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 924482 |
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| End bp | 925639 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640531270 |
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| Product | putative integrase |
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| Protein accession | YP_001215784 |
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| Protein GI | 147672386 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTATGG CAATAACGGA TGCATGGTTA AGAGCAACCA ATGGCAAACC CTATTCAGGT
AAGACTGAGA TAAGCCACAG ATTTGGGCTT GGCGTTCGTG TTAGCCCTAA AGGCAAGATC
ACTTGGGTTT ATCGGGCTAA CATCAACGGT AAAATGCAGC GCATCAAATT GGGTGAATAC
CCAGCAATGA AGCTGCGCGA TGCAATCCAA GCCAGAGAAA GCCGAGCTGA GTTAGTCGAG
CTTGGTTTTG ACCCAAGAAA ATCCACAAGA TCTGCTAACG ATGACTCAAT AATCACTTTG
AACGATCTTA TCGATTATTG GGCAGAGAAC CATGCAAGAG ACAACATAAA GCAGTGTGAT
GCATTGCTGA AAATGTTCCA CACCGATATC ACTCCTACAC TCGGTAATTA CCCAGCAAAA
CAACTCGAAC TGATCGATTT CATGCCTGTT TTCTTGAAGG CTAAAAGGCG GGTGAGTGCA
AAGCATTCGG CTAACCTGAT GACACGTTTC AAGCAAGTAC TCTCATATGC AGTGCGTCAT
GGTTTGTTGA AATACAACGT ACTGACGGAA CTTAAAAAAG CCGATGTTGG GGTGCCCACT
ACACCGAAGA GAAGCCGCCA AGACGAACAA GGTGTCAAAG CACTTTGGAA AGCGATTGAT
GATATTTCCA TTCACGAGAG CAATAAAAAC TTTCTGCGCT TGATGCTGAT TTTTGCCAAC
CGCAGTAACG AATTGCGGCT GGCTAAAAAA GCAGACTTTG ATCTTGAGAA ACGAGTGTGG
ACAGTCCCCG AAGAGAATAA CAAGGTTCGT AAGAAGCAAG GCGGTGCTAT TCGCAGAGCT
ATTCCCCCTC TTGCTGAAAA AATTATCATG GAGCAATTTG CCATTTGGCC GAATCACACC
ATGATGTTCC CCCCGGTGAA TACGGAACAA GACAGGCCAA TGTCAGCTAA CGTGCCTGTC
GATTTTGGCA GCAAGCTGGC CGATAGAATT GAAGAACTCG GTTTCCCGCG CACAACCAAT
CACGATATGC GAAGAACGGC GCGTAACATT TGGGAGTCAA TGGGTGTGCC ATACCACGTG
GCAGAGACAA TGTTAGGCCA TAAAGTGCAT ACTGGTGTTC AGAGTCATTA TTTAGGGAAG
ATGCGATTAA GTCTCTGA
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| Protein sequence | MSMAITDAWL RATNGKPYSG KTEISHRFGL GVRVSPKGKI TWVYRANING KMQRIKLGEY
PAMKLRDAIQ ARESRAELVE LGFDPRKSTR SANDDSIITL NDLIDYWAEN HARDNIKQCD
ALLKMFHTDI TPTLGNYPAK QLELIDFMPV FLKAKRRVSA KHSANLMTRF KQVLSYAVRH
GLLKYNVLTE LKKADVGVPT TPKRSRQDEQ GVKALWKAID DISIHESNKN FLRLMLIFAN
RSNELRLAKK ADFDLEKRVW TVPEENNKVR KKQGGAIRRA IPPLAEKIIM EQFAIWPNHT
MMFPPVNTEQ DRPMSANVPV DFGSKLADRI EELGFPRTTN HDMRRTARNI WESMGVPYHV
AETMLGHKVH TGVQSHYLGK MRLSL
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