| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0768 |
|---|
| Symbol | |
|---|
| ID | 5134895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | + |
|---|
| Start bp | 815035 |
|---|
| End bp | 816693 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640531090 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001215604 |
|---|
| Protein GI | 147671704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.914496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAC TTTACATATT TAGACGAGTA TCTAGTAAAC GCCAAACCAA CAAAACAGGT
TTAAAGATAC AAGTTCGCCC TGAAACTGTA GAGCGTTTAT TGTCTGAACA TGGTTTATCA
GAGGTTGTTG ATCTTGGGGC TGAGGTTGCC AGTGCAAGCA AAGGTAAGCA TATCGAAGAA
GGGAGTATTT TAAAACGCTT TTTAATGAAA TGTGAGCGCG GAGAAATTGA ACAAGGGTCA
ATACTCGCTG TTTATTCCCT CGACCGTCTA AGCCGCCTTG AGAAGCTTGG ACTGGCTAAG
AGTCTAATCT ACTTGCCGAT TACAAACAAC GGCGTGAGTA TATTCGGTGA AATAGACAAT
TTCCTATACA AACCCCACGA TGTTTTGAGT GAAATATTAT CAAGCTTAGT GTTTGAGCGT
GCAGCCGAAG AGAGCCGAGC AAAGAAAAAC CGTAACATTG ACAGTTTAGC GGCTAACCTC
GCACAGTATC AGCGAGATGG ACAATACACA ACAAAACTGG GTAAATCTCC TAGTTGGATA
AATCACAAAA CAGGTAAGCT TAACGAAGAG GCTGTATTGT GGCGTGAGGT GATTAATTGT
TATACAAGTG GACAATATAA AAACTTATCC GCATTGCATA CAGCTATGCA ATTGGCAATA
CCCTACAACA CATTGAGCAA GGTTATTAAT AACGCTCACA AAACGCTTAT AGGGACAAAG
GTTATTAAGG GTGTGGAGCT TGCAGAATTT TATGAGCCAT TGTTAACACA AGAGGAATAC
AACCGTTTGT TGATTTATGT CCGACAAATG GGAACTGGTA AAGGTAAAGC TATTGCCACC
ACTAAAACCG AGAATATCTG GCTATTGAAG GGATTAGGAG AATGTCCTCA ATGCGGTAGT
TTGTGCGGGA GCTTCAAGAA TGGTGCAAGT GTTAAAGATA AGGTGAGGTA TAACTACCGA
TGCAATGCAG CCATAAACAA GCATTGTGAT AGTCCCACGT ATAACCTAAA CCCTATAGAG
GCTATCGTAA CGCTGTTATC AGCCGACTAT TTGCATGAAG TTAGCCAAAG GGAAACCAAC
ACCGAACTAA ACGCTAAAAT TGAAGCTATG CAGGTAGAGG TTGAACGGTT AGAAACACAA
TTAGACCAAG CAACACAAGC CTTAAATACC TTTTTCAGCC CTGAGTTGGC ACAAGCCATA
CCAAAATACC GAGAACAACT AGAAACCGCC CAAAACGAAC TACAGACACT ATTAGCATTA
GCTTCTAACC ACACACCAAT TAATGAAAGC TTATTATCAG CAGAGATTAT ATTAGACAAA
GCTAACCCTG AAAGGGTGAA GCTTGTTAAA TTGTTGCAAG GTTGTATTAA TCGCGTGATT
GTTACACGTA AGAGTGTTAA AAAGGGTGAC ATACGATTTA ACCCAAAGAT TTACACAGGC
TGCGATTACT CTCTGTTGTG CGTAAGGGTG GAATTTATAG ATGGGAATAT TAGGGTGTTT
GATAGTGTGC TTAGGGACAA CCTACGTTTA AATTTAAGTG TTAGCGATGG CACAAGATCA
ATTGGTTTAG AAAACTTTCA TAGATTTAGC CGAAGGTTGA GAGAATACGA TTTGATAAAA
TATTGTGTGA TAAATAACCG CAAGCTGAAA ATCACGTAA
|
|---|
| Protein sequence | MPKLYIFRRV SSKRQTNKTG LKIQVRPETV ERLLSEHGLS EVVDLGAEVA SASKGKHIEE
GSILKRFLMK CERGEIEQGS ILAVYSLDRL SRLEKLGLAK SLIYLPITNN GVSIFGEIDN
FLYKPHDVLS EILSSLVFER AAEESRAKKN RNIDSLAANL AQYQRDGQYT TKLGKSPSWI
NHKTGKLNEE AVLWREVINC YTSGQYKNLS ALHTAMQLAI PYNTLSKVIN NAHKTLIGTK
VIKGVELAEF YEPLLTQEEY NRLLIYVRQM GTGKGKAIAT TKTENIWLLK GLGECPQCGS
LCGSFKNGAS VKDKVRYNYR CNAAINKHCD SPTYNLNPIE AIVTLLSADY LHEVSQRETN
TELNAKIEAM QVEVERLETQ LDQATQALNT FFSPELAQAI PKYREQLETA QNELQTLLAL
ASNHTPINES LLSAEIILDK ANPERVKLVK LLQGCINRVI VTRKSVKKGD IRFNPKIYTG
CDYSLLCVRV EFIDGNIRVF DSVLRDNLRL NLSVSDGTRS IGLENFHRFS RRLREYDLIK
YCVINNRKLK IT
|
|---|
| |