Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0608 |
Symbol | sdaA-2 |
ID | 5134072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 662698 |
End bp | 664128 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530930 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001215447 |
Protein GI | 147671532 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGGTTTG TGCCATCATA CCTGATTGGC TTTATAACGC TTTATCTTAA GGGGAAAGTT ATGCTCTCAA TCTTTGATAT TTACAAAATT GGGGTTGGCC CTTCCAGCTC GCATACCAAT GGGCCGATGA TTGCAGGTTA CCGTTTTGTG CAGCAGTTAT TGCCACAGCT GAATAAAGTT GCTCGCATAC AAGTGGATCT GTATGGCTCG CTGTCTTTAA CGGGGAAAGG GCACCACACT GATCGTGCGA CCTTACTGGG CTTAATGGGG AATCAACCTG CCACCATCAA GATTGGTGAC GCTAATCAGA CTCTACGTGA AGCGTTGCAA ACGGGTAAGT TGCGTCTCAA TGGTCAGCAT GACATTGCCT TCGATTACCA TCAGGATCTT CTTTTTCATC AAGATAATCT GCCGCTGCAC GAAAATGGTA TGACGTTGAG CGCGTTTGAT ACTCAAGGAC AACAGATTGA TTTTGAAACC TATTATTCAG TCGGTGGTGG CTTTGTTGCG ACCGCTGAGC AGTTGCAAAA TGGTACCGCG ACCGCCGATG TGACGGTGAC TTACCCCTTT ACCAGTGCCG ATGAAATGCT GCACCAAGCT GAAAAACATG GTTTGAGTTT AGGCGGAATG ATTTTGCGCA ATGAACTGGC TTTTCAAGAG ATGGCGGTGA TTGATGCCAA GGCCGATCAA ATCTGGCGAG TGATGAGCCA GTGTATGGAG CGTGGTTTTG CGACCGAAGG CATTTTAGAA GGGGGATTAA ATGTCACTCG CCGTGCGCCG AGTTTGCTGA AAAAACTTGA AGCCAATGCG GCGATTGAAA ATGATCCGAT GGAAGTGATG GATTGGATTA ACCTCTTTGC TTTTGCGGTG AGTGAGGAGA ATGCCGCTGG TGGACAAGTG GTGACATCGC CCACCAATGG AGCCGCGGGC GTCATCCCTG CAGTTTTGAT GTATTACCAC CGTTTTATCA AAGCGCTCGA TACCAAGCAG CTTAAGGATT TTCTCGCTGT GTCTGGCGCG ATCGGTATCT TGTATAAAAC CAATGCCTCC ATTTCCGGTG CTGAAGTTGG GTGTCAGGGT GAAGTGGGCG TTTCTTCCTC CATGGCCGCC GCAGGCTTAA CGGCTTTGCG TGGTGGCAGT AATGAGCAAA TCTGCATGGC GGCAGAAATT GCTATGGAAC ACTCATTAGG GATGACCTGC GACCCGATAG GCGGTTTGGT GCAAGTGCCT TGTATTGAGC GTAACGCGAT GGGTGCAGTG AAAGCGATAA ATGCTTCGCG CATGGCGCTC AAGCGAACCA GTAAGTGTCT GATTTCACTC GACAAGGTGA TTGAAACCAT GTATCAGACT GGGAAAGATA TGAATAAAAA ATACCGCGAA ACTTCGCTCG GAGGATTGGC GCTAATCCAT CTCGCGCCCC CTTGTGAATA A
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Protein sequence | MRFVPSYLIG FITLYLKGKV MLSIFDIYKI GVGPSSSHTN GPMIAGYRFV QQLLPQLNKV ARIQVDLYGS LSLTGKGHHT DRATLLGLMG NQPATIKIGD ANQTLREALQ TGKLRLNGQH DIAFDYHQDL LFHQDNLPLH ENGMTLSAFD TQGQQIDFET YYSVGGGFVA TAEQLQNGTA TADVTVTYPF TSADEMLHQA EKHGLSLGGM ILRNELAFQE MAVIDAKADQ IWRVMSQCME RGFATEGILE GGLNVTRRAP SLLKKLEANA AIENDPMEVM DWINLFAFAV SEENAAGGQV VTSPTNGAAG VIPAVLMYYH RFIKALDTKQ LKDFLAVSGA IGILYKTNAS ISGAEVGCQG EVGVSSSMAA AGLTALRGGS NEQICMAAEI AMEHSLGMTC DPIGGLVQVP CIERNAMGAV KAINASRMAL KRTSKCLISL DKVIETMYQT GKDMNKKYRE TSLGGLALIH LAPPCE
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