| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0590 |
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| Symbol | |
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| ID | 5135003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 641392 |
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| End bp | 643209 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530912 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215429 |
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| Protein GI | 147672443 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3176] Putative hemolysin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.803828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGAAAAA GATCGGGCGC ATCATATCGC TCAGGGCGAC CAAAATTGGC CTGCGCTGAT
TGGGACAAGC GAATGATGCA AACCCAGCCA TTTCGATTGC CGCGCTTCAC CCCATTTGGG
GTGATAGAAA AGGGGGTAGA GTTAGCGACG GGGCTTAGTC AGCTAGAGCG CTATTACCAA
CAAAGGCCAA CCACGCGTGA TGGTTTTGAG TTTATGCGTT ACACCCTTGA AGCGCTCAAT
GTGCATTACC AAGTGGATAG AGGCCGCGTT GAACAGATCC CCGCGCAAGG GCCTGTGGTG
ATTGTGGCCA ATCATCCGCT TGGTGCCATT GAAGGGGTGA TTTTGGCCGA TTTGGTTGGG
CAAGTACGCA AAGATGTCAA AGTGCTCGCT AATCAACTGC TTAAACGCTT ACCTGAAATT
GAACCTCTGT TCATTGGTGT GGATGTGTTT AATGGCGCGC AGGCGAGTAA AACCAATGCA
CGAGGTATTC GAGAAGCACA CCGACATTTA GCGGAAGGTG GCGTACTGAT CGTATTTCCC
GCCGGTGAAG TTTCGACACC GCAAAAAGAA ACCGGACAGT TGAGTGATAT TGACTGGAGT
CAATCCGTTG CGAAATTCAT TCAGCGTAGC CAAGCGACGT GCGTGCCGAT TTATATTTAT
GGTCGTAACA GCGCGTGGTT TTATCGCGCT GGAAAAATTC ATCCGCTCTT GCGCACCGCC
ATGTTAGGTC GAGAGCTTTT GAATAAAAGC GCGAGCACCA TTTCCCTATG CATTGGTCAG
CCGATTCCTT ATGCGGAATT AAAAGAGTTC ACCAAAGATG AAGATGTGGT CAATTACTTG
CGGCTCAATA CCTATTTGAT GAGCCCGCAT GGCCAAGCTG AATCGGCAAA AGTCTCTTTT
ACGATTCCGG TAATTGATCC TGTACCTAAA GCAGCTCTCA TCGCAGAGCT TGCTCAATTA
GATAAGCAAG CCAAGTTATT GGAGCAGGGT GAATTCACCG TGTACTGCGT ACCTTCAACC
CACATTCCAC TCATGATGCA AGAAATTGGT CGTGTGCGTG AAATCAGTTT CCGCGCGGTG
GGGGAAGGCA GCGGGCAGGC TTGCGATGTG GATGCGTATG ATCACTATTA TTGGCAACTG
TTCGTTTGGA ATCGAGAGCA GAGCGAGCTG GTTGGTGCGT ATCGCATGGG CTTGGTCGAT
AAAATTGTCG CAGAAAGAGG GCTGCAAGGC CTCTATTCCC GTAGCTTGTT TCATTACGAT
CACGCTTTCT TGGCGACCTT AGAGAATGCG ATTGAGCTTG GTCGCTCAGT GGTGGCTGAA
CAGTATCAAC GTAATCTCAA CTCATTGCTT TTACTCTGGA AAGGCATTGC GCGTTTCGTA
GAATTGAACC CACATTACAC CCATTTGTTT GGCCCGGTCA GCATCAGCAA TGATTACAGC
CCAGCGGCTC GACAACTGAT GGCTGCGACT TTATCCATCC ATCACTATGA TCAACATAAA
GCGGCTTTGG TCAGTCCATC AACCCCTTTG CGTGCCGGAA CAGAAGTGTT TTGGCAAAAG
AGCTTGCTAT CGGCACTCGC CAGTGTCTCT TTGCTCTCAA AAGTAGTTGC GCGGATGGAG
CAGGGCAACG GGCTGCCTGT GTTGCTGCGC CAGTATCTCG GTATGAATGG CAAGTTGGTC
TGTTTTAACG TTGATCCTGC TTTTAACGAT GCGTTAGATG GCTTGATTGT GGTGAATTTG
AAGCAAGTAC CACTGAAAAC GTTGGCTAAA TACATGGGTA AAGAGGCTGC GCAGCATTAC
CTTTGCTCAG TGACGTAG
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| Protein sequence | MGKRSGASYR SGRPKLACAD WDKRMMQTQP FRLPRFTPFG VIEKGVELAT GLSQLERYYQ
QRPTTRDGFE FMRYTLEALN VHYQVDRGRV EQIPAQGPVV IVANHPLGAI EGVILADLVG
QVRKDVKVLA NQLLKRLPEI EPLFIGVDVF NGAQASKTNA RGIREAHRHL AEGGVLIVFP
AGEVSTPQKE TGQLSDIDWS QSVAKFIQRS QATCVPIYIY GRNSAWFYRA GKIHPLLRTA
MLGRELLNKS ASTISLCIGQ PIPYAELKEF TKDEDVVNYL RLNTYLMSPH GQAESAKVSF
TIPVIDPVPK AALIAELAQL DKQAKLLEQG EFTVYCVPST HIPLMMQEIG RVREISFRAV
GEGSGQACDV DAYDHYYWQL FVWNREQSEL VGAYRMGLVD KIVAERGLQG LYSRSLFHYD
HAFLATLENA IELGRSVVAE QYQRNLNSLL LLWKGIARFV ELNPHYTHLF GPVSISNDYS
PAARQLMAAT LSIHHYDQHK AALVSPSTPL RAGTEVFWQK SLLSALASVS LLSKVVARME
QGNGLPVLLR QYLGMNGKLV CFNVDPAFND ALDGLIVVNL KQVPLKTLAK YMGKEAAQHY
LCSVT
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