Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0572 |
Symbol | |
ID | 5134953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 626742 |
End bp | 627782 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640530894 |
Product | hypothetical protein |
Protein accession | YP_001215411 |
Protein GI | 147671548 |
COG category | [R] General function prediction only |
COG ID | [COG3180] Putative ammonia monooxygenase |
TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAAA GAGCTTCTTT CACACTCTTT ATTCAAATCT TGATTATCGC CACCGTGGCT GCGGGGGCAG GGACGCTACT CTCCATCCCA CTTTCTGAAA TGTTTATTGC CTCGGGTTTG GTTATTGTGC TGCACAAGAA GCGTTGGCTA ACTATTCATA CGCCGCCGTG GCTGCTGCTG TTTGTGCAAG TCGTGCTTGG GATCAGTGTC GGTGCGACCA TCAGTTTGAG TGAGCTAGGT ACCACCTTAA CCTTGCCGGT GATCGTGGGT TTGGTGTGCT GTTTAACGCT GCAAATCATC AGTAGCTATT TGTGGCTCAC CAAAAAAGAG GGTTGGACGC CGTTTGAATC TCTACTCGGT GCCGTACCGG GTGCAATGGC CGCGATTTTG GTGATCAGCG AATCAAGCGA AAAGCCTTCC GCCAAAGTGG TCTATTCCCA TTCTGTGCGA CTGATGATCC TCACTTTGTT GGCACTGTTG ATCTCCAACA GCGCGCCAGA TAGCGCATCC GTAGGCGGCA GCCTGACCGT TTACACTTGG CTTATTTTCT TGGCTCTAGC GCTGATGAGT TTGCTACTGG GTAAAGCTTC CACCTTACTC GGCATTCCTG CGCCTTATAT GTTGGCTGCG TTACTCATCA CCGCCAGCTT TAATGGCTTT GCCACCGGCA TTGATATGCA AGTGCCGAAA TGGATGGTGA TATTCGCCAC CGCTTTACTC GGCATTTTGA TCGGCTCACG CATTGCCGAT ACCACACTGC GCGAAGCCAT GGCGTATTCC CGCGCAGGGG TAATGGTCAC CATGATTGGC CTTTTGGTCG CGGTGGGTGT CTCCGGTGTC TTTTCTATTT TGATCGATAA ATCATGGGTC GTGCTGCTGC TTTCTTGGGT TCCCGGTAGT GTAGAAGCCA TGACCGCTGT CGCCTTGTTA CTCGGCATGG AACCGGCGTT TGTGATGATT AACCACGCTC TGCGCCTGTT GTTGCTCTAT TCACTGCCCG CCATGCTGAA AAAGCAGTTG GAGGAGTTGA GGGGGAGATG A
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Protein sequence | MSERASFTLF IQILIIATVA AGAGTLLSIP LSEMFIASGL VIVLHKKRWL TIHTPPWLLL FVQVVLGISV GATISLSELG TTLTLPVIVG LVCCLTLQII SSYLWLTKKE GWTPFESLLG AVPGAMAAIL VISESSEKPS AKVVYSHSVR LMILTLLALL ISNSAPDSAS VGGSLTVYTW LIFLALALMS LLLGKASTLL GIPAPYMLAA LLITASFNGF ATGIDMQVPK WMVIFATALL GILIGSRIAD TTLREAMAYS RAGVMVTMIG LLVAVGVSGV FSILIDKSWV VLLLSWVPGS VEAMTAVALL LGMEPAFVMI NHALRLLLLY SLPAMLKKQL EELRGR
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