Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0548 |
Symbol | phnX |
ID | 5134961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 604636 |
End bp | 605451 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640530870 |
Product | phosphonoacetaldehyde hydrolase |
Protein accession | YP_001215387 |
Protein GI | 147671852 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01422] phosphonoacetaldehyde hydrolase [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000564985 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACT CTCCGATTCA AGCCGTTATT TTCGATTGGG CTGGCACTAT TGTGGATTTT GGATCCTTTG CGCCGACCTC GATTTTTGTT GAAGCTTTCA AGCAAGGCTT TGATTTTGAG ATTAGCCTTG CCGAGGCTCG CGAGCCGATG GGACTGGGCA AATGGCAGCA CATTGAAGCC GTCGGAAAAC TCCCAACCGT TGCGCAGCGC TGGCAGAAGC AATTTGGACG CCCGATGCAA GCCAGCGATA TTGATGCGAT TTACGCCGCC TTTATGCCGC TGCAAATCGC CAAAGTCGCC GATCACGCTG CACCGATTCC TCACTCACTT GAAGTGGTTG AGCAGATCCG ATCGCGCGGG ATCAAAATCG GCTCTTGCTC TGGTTATCCA CGCCAAGTGA TGGATGTGCT GATCGCTGCG GCTGCCGATT ACGGTTATCG TCCTGATTAT GTGGTTGCTA CCGATGATTT AGCGCAAGGT GGCCGCCCCG CCCCTTTTAT GGCACTCAAA AATGTCATTG AGCTTGGCGT GACCGATGTA CGCGCTTGTG TGAAAGTCGA TGATGCCCTG CCCGGCATCG AGGAAGGTCA TAATGCGGGG ATGTGGACGG TTGGTTTACT GCTGTCAGGC AACGAAGCCG GGTTAACCCT TGAAGAGTAC CAACATGCTG ATGACCAAAC GCTACAAGCG GCGCGCGAAC GTGCACAAGC CAAACTGCAA CAGGCAAAAC CGCATTATTT GATCGATACG GTTGCAGACT TGCCTGCCGT GCTCGCGCAA ATTGAGCAAA GATTATTAGC CGGTGAACGC CCTTAA
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Protein sequence | MMNSPIQAVI FDWAGTIVDF GSFAPTSIFV EAFKQGFDFE ISLAEAREPM GLGKWQHIEA VGKLPTVAQR WQKQFGRPMQ ASDIDAIYAA FMPLQIAKVA DHAAPIPHSL EVVEQIRSRG IKIGSCSGYP RQVMDVLIAA AADYGYRPDY VVATDDLAQG GRPAPFMALK NVIELGVTDV RACVKVDDAL PGIEEGHNAG MWTVGLLLSG NEAGLTLEEY QHADDQTLQA ARERAQAKLQ QAKPHYLIDT VADLPAVLAQ IEQRLLAGER P
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