| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0362 |
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| Symbol | dsdA |
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| ID | 5134766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 395859 |
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| End bp | 397184 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530685 |
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| Product | D-serine dehydratase |
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| Protein accession | YP_001215203 |
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| Protein GI | 147672032 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3048] D-serine dehydratase |
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| TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACGA TCAACATAGA GCAACTTACC GAGCAATATC CGCTAGTCAA AGAGCTCATC
GAGCTTAAAG AGGTATCTTG GTTTAACCCA TCCATTACTC GCCTTGAGGA AGGGTTAAGC
TACGTTGGAC TTGGTTCTGA GGATATTCAA GATGCGAGTC AACGCTTAAA ACGATTCGCA
CCTTATCTTG CAAAAGCGTT TCCAGAAACC GCGAAAACAA ACGGAATTAT TGAGTCTGAG
GTCGTTCCCA TTTCAGAGAT GCAAAGCGTG CTTGAGCGTG AATATGACAC CCCAATACAA
GGTCGATTAC TCCTCAAAAA AGACAGTCAC TTACCCATTT CTGGCTCTAT AAAAGCGCGA
GGCGGGATCT ATGAAGTGTT GACTCACGCA GAAAAACTCG CGATAGAGGC CGGATTGCTG
ACGGAGTCAG ATGACTACAG CAAACTCTTA AACGAAGAAT TTCGTGATTT CTTTAAACGG
TTCAGTATTG CAGTGGGTTC GACCGGAAAT CTGGGGATGT CGATTGGGAT TATGAGTGCT
AAGTTAGGTT TCTCGGTTTC TGTGCATATG TCAGCCGATG CAAGGGCGTG GAAGAAAAAC
AGACTCCGTG CTCTTGGGGT CAATGTGATT GAGTACGCCC AAGATTATGG TGTTGCGGTC
GCTCAGGGGC GCAAAGAAGC TGAAAATGAT CCGACGTGCT TTTTCATTGA TGATGAAAAT
TCGCAAACTC TATTTCTAGG GTATTCGGTT GCAGGTGAAC GCCTCAAGAA ACAGTTCGAT
GAAAAAGGTA TTGTAGTCGA CGCGCAGCAC CCTTTATTTG TTTACCTACC CTGCGGCGTT
GGTGGGGGAC CGGGAGGGGT TGCTTTCGGT CTGAAAATGG CTTTTGGGGA CAATGTTCAT
TGTATTTTTG CTGAGCCGAC TCATTCTCCA TGCATGATGC TTGGTGTTCA TACTGGCTTG
CATGACGCAA TCAGTGTTCA AGATATCGGG ATTGATAACA TCACTGCAGC TGATGGTTTA
GCGGTGGGGA GAGCTTCTGG TTTTGTCGGT CGAGCAATGG AAAGGCTGCT GGATGGCTAT
TTAACCATCA GTGATGAGCG TATGTACCGA CTGCTTGGGC AATTGAATGA AGCGGAGAAT
ATCCAGCTCG AGCCTTCTGC ATTAGCCGGT ATGATTGGCC CTATCGTGGT CACAAAGAGT
GTTGAATATC GAGCTCGAAT GCAGTTTGAT GATACCGTGA TGGGGAATGC CACGCATCTT
GTTTGGGCGA CTGGCGGGGG AATGGTTCCA GCAGAAGAGA TGGACTCTTA CCTAAAAAAT
CGTTGA
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| Protein sequence | MMTINIEQLT EQYPLVKELI ELKEVSWFNP SITRLEEGLS YVGLGSEDIQ DASQRLKRFA
PYLAKAFPET AKTNGIIESE VVPISEMQSV LEREYDTPIQ GRLLLKKDSH LPISGSIKAR
GGIYEVLTHA EKLAIEAGLL TESDDYSKLL NEEFRDFFKR FSIAVGSTGN LGMSIGIMSA
KLGFSVSVHM SADARAWKKN RLRALGVNVI EYAQDYGVAV AQGRKEAEND PTCFFIDDEN
SQTLFLGYSV AGERLKKQFD EKGIVVDAQH PLFVYLPCGV GGGPGGVAFG LKMAFGDNVH
CIFAEPTHSP CMMLGVHTGL HDAISVQDIG IDNITAADGL AVGRASGFVG RAMERLLDGY
LTISDERMYR LLGQLNEAEN IQLEPSALAG MIGPIVVTKS VEYRARMQFD DTVMGNATHL
VWATGGGMVP AEEMDSYLKN R
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