| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_2648 |
|---|
| Symbol | |
|---|
| ID | 8640677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013526 |
|---|
| Strand | + |
|---|
| Start bp | 823135 |
|---|
| End bp | 825987 |
|---|
| Gene Length | 2853 bp |
|---|
| Protein Length | 950 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | helicase domain protein |
|---|
| Protein accession | YP_003324358 |
|---|
| Protein GI | 269839666 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCT CGGCGTACCC CGTAGGCACC ATCGTGCGCG CCAGGGACCG CGACTGGATA
GTCCTGCCCA GCGACCACGA CGACCTGCTG ATGCTCAGGC CGCTGGTGGG CAGCGATGAG
GAGTCCATCG GGGTGTTCCT GCCGCTGGAG GGGGATGATG TCAGGCAGTC CAGCTTCCCC
GCCCCCAGCC CGGAGCGCCC GGGCAACGTC TTCGCGGCGC TGGCGATCGC CGACGCCGCC
CGGATGATCA TCCGCTCGGG CGCCGTGCCG TTCCGGTCGC TCGGCAGGTT GTCGTTCGTC
CCCAGGCCCT ACCAGTTCGT ACCGCTGGTG ATGGCGCTCC GCCAGCGGGT GGTGCGCCTC
CTGATAGCTG ACGACGTGGG CGTGGGCAAG ACGATCGAGG CCGCGCTCAT CGCCCGCGAG
CTCCTCGACA GGGGCATCAT ACGGCGCCTG GCGGTGCTGT GCCCCGCGCA CCTCTGCAGC
CAGTGGCAGA CCGAGCTCGC AGAGAAGTTC TCCATCCACG CCGAGGTCGT GCAGCCCTCG
ACGATCGGCA GGCTGGAGCG CAACCTGCCG CGCACGGACG TGTCGATCTT CAAGCACTAC
CCCTTCCTGG TAGCGAGCAT CGACTTCCTC AAGGGCGACC GGTACAGGGA GACCTTCGTG
CGCGATGCCC CGGAGCTGAT CATCGTCGAC GAGGCGCACA TCGCCACCCG CCCGGGGGAG
CGGGGCTCCT CCCAGCAGCA ACAGCGCTAC AGCCTGCTGT CGGCGCTGGC CAGGCGGGCC
GACCGCCACC TGGTGCTGGT GACCGCGACG CCGCACAGCG GCATAGAGGG CAGCTTCAGG
TCGCTGCTGG GCCTGCTGGA CCCCAGGTTC GACGCCGAGC TCGACCAGCC CCTGCCGTAC
GACGCGCTCC ACCGCCACTT CATTCAGCGC CGTCGGGCGG ACCTCAGGCA GTGGCTGGGC
ACGGAGACCC GCTTCCCGCA GCGGCAGAGC ATCGAGAAGA CCTACCTGCT CACCGAAAGG
TACCTGGGGT TCTTCGACGA GGTGTGGAGC TACTGCCGGG AGCTCCTCTC CGAGCAGCCG
GCCCTCGGCA GGTACCAGCA GAGGATGCGC TACTGGGGGG CTCTCTCCCT GCTGCGCTGC
ATCCTATCCA GCCCCAGGGC GGCGGTCGCC GCGCTGGAGG CACACCGGGA GAACAGGCTC
GGGCAGCTCA TGAACCAGGC CGAGGACCAG CTCGTGGAGG CGGTGGACCA GTCGTACCGG
CCCGCCGTGT TCGAGAGCCT CGAGCAGGAG GAGGCCAGCG ACTACCTCAC GGTCGCCGGC
GGTGACATGG GCACGGCCCA GGACAGCACC CTCCGGCAAA GGGTGAGCCG CTTCATCGAC
AGGGCCCGGA GGCTCGAGGG TCCCGAAGCC GATGCCAAGC TCGCCTGCCT GGCGGACACC
CTGCGCGAGC TCCTGCGCGA CGGCTTCCAG CCCATCGTGT TCTGCTACTT CATCCACACC
GCCAACTACC TCAAGGAGCA CCTGGAGCCC CTGCTCCGGG GGGAGTTCGA GGACCTGCAG
GTGGAGGCGG TCACCGGCGA GCTCAGCGAG GACCAGCGCA AGGAGAGGAT CGCCCAGCTG
GCGCAGGCCC CCCGCAGGGT GCTCGTCGCC ACCGACTGCC TCAGCGAGGG CATCAACCTG
CAGGACCACT TCGACGCCGT CGTGCACTAC GACCTGCCCT GGAACCCCAA CCGCCTCGAG
CAGCGGGAGG GCAGGGTCGA CCGCTTCGGC CAGCAGCGCG ACGAGGTGCG CGCGGTGACG
ATCAGCGGCG AGAACAACCC CGTCGACCTC ACCGTCATGA GGGTGCTCGT CCGCAAGGCG
CGGAAGATCC GGGAGCAGCT GGGCATCTCG GTGCCCGCCC CCGCCTACTC CGAGCGCCTG
CTGGAGTCGC TCATCTCGCA GCTGATGTTC ACCAGGCTCA ACCGCCGCAG CCCCGGGCAG
CTGCCCCTCA GCCTGGAGTC GGACGACGTG CAGAGCTTCC ACCAGGCGTG GGACCGCTCC
GCCGAGAGCC AGCGTCCCCT GTTCAGCCAG GAGACGATCC AGCCCGACGA GATCCAGCAG
CAGCTGGAGG CTGTGGACTC CGTCCTGGGC ACTCCCAAGA CGCTCGAGCG GTTTCTCCAG
ACGGTGGCCC CGCGCTTCCG CGGCTACCTC CACCCCAGGG GCAGGGCCGG CGCCTTCGAG
CTCGACCCCG GGGAGCTCCG CGACAGGCTG ACGCCGCTGG GGTACTCCAA GTGGCCGCTG
CGGGTCGTGT TCGACCGCCA GCGGGACAGC ACCGCCGAGT ACATCGGGCG CACCCACCCC
ATCATCGAGA CCCTCTGCCG CGAGGTGCTG GGCCGCGCCA TGCAGGACGA CCACGACTTC
GCGCGCACCT CCGCCGCCTA CACCCGGCTG GTGGAGCGCC GCACCTTCCT GGTGATCCTC
AGGGTCCGCT ACCTCATGCG GGACGTGGTC GAGCAGTACG CCGAGGAGGT GCTGCCGCTG
GCGATCCGGC TGCAGGGGGG GCGCCCCTCG CCCTTATCCC CACACGTGGT GGAGGGCAGG
CGGCTGCTCG AGGCCTTCGC CGACCCCGAG AACTTCACCC GCCGGGAGAT GCCCCTTGTC
GAGCGCCAGG AACACATCGA CGAGCTGCTC GAGGGCTTCC GGGCCCACCC GGACTGGTAC
CGCGAGGTGC TCGAGGGCCG GCGCGAGGAG ATCATCCGGT CGAACAGGCG GCTGAACAGC
CTGGTGGGTG GCGACACCGA GCTGCAGGTG GAGCCCCAGG AGCCGCCGGA CGTCCTTGCG
ATCTACGCAC TGGTACCAGG AGGTGATGCC TGA
|
|---|
| Protein sequence | MSSSAYPVGT IVRARDRDWI VLPSDHDDLL MLRPLVGSDE ESIGVFLPLE GDDVRQSSFP
APSPERPGNV FAALAIADAA RMIIRSGAVP FRSLGRLSFV PRPYQFVPLV MALRQRVVRL
LIADDVGVGK TIEAALIARE LLDRGIIRRL AVLCPAHLCS QWQTELAEKF SIHAEVVQPS
TIGRLERNLP RTDVSIFKHY PFLVASIDFL KGDRYRETFV RDAPELIIVD EAHIATRPGE
RGSSQQQQRY SLLSALARRA DRHLVLVTAT PHSGIEGSFR SLLGLLDPRF DAELDQPLPY
DALHRHFIQR RRADLRQWLG TETRFPQRQS IEKTYLLTER YLGFFDEVWS YCRELLSEQP
ALGRYQQRMR YWGALSLLRC ILSSPRAAVA ALEAHRENRL GQLMNQAEDQ LVEAVDQSYR
PAVFESLEQE EASDYLTVAG GDMGTAQDST LRQRVSRFID RARRLEGPEA DAKLACLADT
LRELLRDGFQ PIVFCYFIHT ANYLKEHLEP LLRGEFEDLQ VEAVTGELSE DQRKERIAQL
AQAPRRVLVA TDCLSEGINL QDHFDAVVHY DLPWNPNRLE QREGRVDRFG QQRDEVRAVT
ISGENNPVDL TVMRVLVRKA RKIREQLGIS VPAPAYSERL LESLISQLMF TRLNRRSPGQ
LPLSLESDDV QSFHQAWDRS AESQRPLFSQ ETIQPDEIQQ QLEAVDSVLG TPKTLERFLQ
TVAPRFRGYL HPRGRAGAFE LDPGELRDRL TPLGYSKWPL RVVFDRQRDS TAEYIGRTHP
IIETLCREVL GRAMQDDHDF ARTSAAYTRL VERRTFLVIL RVRYLMRDVV EQYAEEVLPL
AIRLQGGRPS PLSPHVVEGR RLLEAFADPE NFTRREMPLV ERQEHIDELL EGFRAHPDWY
REVLEGRREE IIRSNRRLNS LVGGDTELQV EPQEPPDVLA IYALVPGGDA
|
|---|
| |