Gene Tter_0827 details

Gene Information

• Locus tag: Tter_0827
• ID: 8645304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013525
• Strand: +
• Start bp: 881248
• End bp: 883311
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 46%
• Product: alpha amylase catalytic region
• Protein accession: YP_003322566
• Protein GI: 269925943

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATCAA GGCGTCTTTT TATAAAAACG TTTGCGCTTG CAGGTTTAGG TTCTCTTTGC 
TCCTCAATAC TAGGATGCTC AATAGGTAGT CGTGGGCAAA CATCTCAATC TACTGCCGTC 
TCCTCGACTC CCGCTAAAGT GCCACAAGTT TCTAATCGAT TGCCAAGCGC TAATCCAACA 
ACAGCATCAA CGCCTGTTAT AGATATATTG ACTCCAGATT TTGAGGCATG GAGCCTCCAG 
GCAGACATAT GGACAGATTG TAAAGATTGT CCTAGTGGAT CAAAAGTATT TGTCTCTACG 
CCATTGGGAA AACGCATCTT GCAGCTGAAG GCGGATAAAC CAACTAGTGT GTCTGTCCGA 
CTGCAACCAG GTACTAACAC CATCACCTCT GGATATATCT CTGCTGATGG TAAGGCTGTC 
GGCACTGATG AGTTAGAGAT TGATGTGAAG ATACCAGCCT TACCTCTACC GCACATATCG 
GCAAAGGTCG ATGGTAGGGA TCTAGTACTT AAAGTCGATT CCTATAGGTT ATCCGGGTCA 
GATCTGATTC ATAACTGGGA TCTTACTCAA ATCTCGAGGC GTTTTATTAT TACCGACTCT 
GGTGATAAAT CTCAGATTAG ACTCTCGCCC AAGGGAATTG TAAGTGGGCA ATTTGAGATT 
GGCCTCCAGG TTAGGGCTGG TCAACACATT TCAGAGAGAG CAATTTTCCA CTTCACGTAT 
GACAAAGGAG AGCCGCAGGT GCCAGACGTG ATGCGTGATC ATCCTGATTG GATAGATTCA 
GCTGTAGTAT ATGGTGTAGT ACCTTTTCTG TTTGGAGATC CTCCTTTCAA ATCTGTAACT 
CAGCGTCTCC CTTACCTGCA CGATCTCGGA GTGAACGCTA TTTGGCTTTC TCCCATAAAC 
GCTACTTTAC CCGGGGACTT TGGGTACGCA GTTGTGGACT ATTTCAAGCT ACGAGAAGAC 
TACGGGACTG AAGAGGATTT CCGAGATCTC GTAAAGACTG CCCATTCCTT GGGCATAAAA 
GTACTTATGG ATTTTGTTCC TAACCACACA TCATCTCAGC ATCCGTATTT TCTAGATACT 
CAAAAGCATG GTAAGTTCTC TCACTATTAC GATTTCTACA TGTACGACAG TAGTGGAAAC 
TATCAGTACT ACTTCGACTG GGCCCATCTA CCTAACTTGA ACTATGATAA TCCTGAGGTT 
CGAGCCTGGA TGATGCGTGC TTTTACCTAC TGGGTAAGGG AGTATGATGT TGATGGCTTT 
AGGGTAGATG TGGCATGGGG TATTAGGGAA CGCAGGCCTG ATTTCTGGCC TCAGTGGAGG 
GAAGAACTCA AGAGCGTCAA GCCTGATCTC TTTCTTCTGG CCGAAGCTAG TGCCCGTGAT 
CCTTACTACT TTACTCACGG CTTCGATGCA GCCTATGACT GGACTGAGGA GCTAGGACAC 
TGGGCCTGGG AGCGAGTCTT TAACCTCGAG AGCATGGTAG TGTGGAGACT TCGTGATGCA 
CTCACTAACT TCGGCCAAGG TTACCATGAG GACGCTCTGA TATTTCGCTT CATCAACAAT 
AATGATACTG GGGAAAGATT CATCTCCAAG TATGGACTGC CGTATACCAA GCTTGCGGCC 
ACGCTGCTGC TAACTCTACC TGGAGTACCT TGTATCTATA CGGGTGATGA GGTTGGAGCA 
GAATACGAAC CTTATTCTGC GGAAGGTCCG ATAAGTTGGG AGGATAAGTA CGGCCTGAAG 
AGTCTCTATC AAAAGCTTAT AGCACTAAGG AGAAATGAGC CTGCTATTCA TAGCAGAAAG 
TGGATGCTTC TGGATACAGA CCCTCAATCT AAGGTGTTAG CCTACACCCG CTTTAGCAAT 
TCCCAAGATA GCTGGTTTCT TGTAGCCCTT AACTTCTCAT CTGAGGATCT TGTTTGCAGG 
ATAAATCTAC CGAAGGATGA TATGAAGCTA AGAACTGTTT CTACCCCAAG GTTGATACTG 
GGGCATCCTG GCAAAATGGA GATAGAGAGT TCGCATATCA ATTTGTCTTT AGGTGCCTAC 
GAAGCCAAGA TATTGGCTTT TTAG 

 

Protein sequence

MPSRRLFIKT FALAGLGSLC SSILGCSIGS RGQTSQSTAV SSTPAKVPQV SNRLPSANPT 
TASTPVIDIL TPDFEAWSLQ ADIWTDCKDC PSGSKVFVST PLGKRILQLK ADKPTSVSVR 
LQPGTNTITS GYISADGKAV GTDELEIDVK IPALPLPHIS AKVDGRDLVL KVDSYRLSGS 
DLIHNWDLTQ ISRRFIITDS GDKSQIRLSP KGIVSGQFEI GLQVRAGQHI SERAIFHFTY 
DKGEPQVPDV MRDHPDWIDS AVVYGVVPFL FGDPPFKSVT QRLPYLHDLG VNAIWLSPIN 
ATLPGDFGYA VVDYFKLRED YGTEEDFRDL VKTAHSLGIK VLMDFVPNHT SSQHPYFLDT 
QKHGKFSHYY DFYMYDSSGN YQYYFDWAHL PNLNYDNPEV RAWMMRAFTY WVREYDVDGF 
RVDVAWGIRE RRPDFWPQWR EELKSVKPDL FLLAEASARD PYYFTHGFDA AYDWTEELGH 
WAWERVFNLE SMVVWRLRDA LTNFGQGYHE DALIFRFINN NDTGERFISK YGLPYTKLAA 
TLLLTLPGVP CIYTGDEVGA EYEPYSAEGP ISWEDKYGLK SLYQKLIALR RNEPAIHSRK 
WMLLDTDPQS KVLAYTRFSN SQDSWFLVAL NFSSEDLVCR INLPKDDMKL RTVSTPRLIL 
GHPGKMEIES SHINLSLGAY EAKILAF