Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1540 |
Symbol | |
ID | 5171376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1530080 |
End bp | 1531222 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640564067 |
Product | glycosyl transferase family protein |
Protein accession | YP_001245124 |
Protein GI | 148270664 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0303814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTGG TTGTGGGGAT ACCGAGTTAC AACAACGCCG AAACGATTTC TCACGTTGCG AGAACAGCGG CGCAGGGAAT TGTAGATTTC TTCGATGGTG ATGGTATGAT CGTGAACTCC GATGGAGGAT CGGCAGATGG GACAAGAGAG CGCTTCATGG AGACCGATAC TTTCGGTCTT CCCAAAGAGA GCTTCGTTTA TGAAGGCCTT CCCGGAAAGG GAAGCGCGAT GAGAGCGATC ATGGAGTTTG CTATGAAACA GGGTGCGGAA GCGGTTGTTT TTCTCGACTC TGATCTTCGA AGTGTCAAAC CCTGGTGGAT CGAAAGACTC GCAGGACCTA TTTTGAAAGG AGAGGCAGAT TACGTCACTC CCTTCTATCT GAGGCACAGG TTTGACGGTA CGATCACGAA CAACGTGTGT TTTCCAATAA CGGCTGTTCT CTACGGTAAG AAGGTGCGAC AACCCATCGG TGGGGATTTC GGTGTGGGAA GAAAGCTCCT CGAGATTTAT CTGGAAAAAC CAAAAGAGAT CTGGAACACG GACGTTGCAA GATTCGGGAT CGACATATGG ATGACCACAA CCGCTATAAA CGAGTCTGGA AGGGTGGTTC AGGCAGCTCT CGGAGCGAAG GTGCACGACG TGAAAGACCC GGGAAAACAT CTGAAGGGAA TGTTCCTTCA GGTCGTGGGA ACGCTCTTCG AACTTGTGAT CACCTACGAA AACGCCTGGA AAGAAGTATG GAAGATAGAA GACGTTCCCA TCTATGGTGA AACTCCTCAA GAGGAAGTTC CTCCTATGAG TATAGATATC GAAAACCTCA AAAAACTCGC AAGAGAAACT CTGGAAGAAG TGGAGTACAT AGACCGCAGC ATCCTGTCGG AAGTGAAAGA AAACGGTACA CTGAGTCTCT CTTCCTGGAT TGACACCCTC TACAGGAGCG CTGTTCAGTA CAGGAAAACA AGGGATAAAA GAGTGGTGGA GAATCTTCTG CCGTTCTACT TCGCAAGAAC CGTACGGTTC GCGGAAGAGG TAAAATCTCT ATCGGATGAA GAAGCAGAAA AATACGTGTA CGAACAGCTC GATGTGTTTC TGGAGAAGAA ACGCTTGTTC AAGGAGGAAT GGGAAGTTGA AAATAAAAGA TAA
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Protein sequence | MKVVVGIPSY NNAETISHVA RTAAQGIVDF FDGDGMIVNS DGGSADGTRE RFMETDTFGL PKESFVYEGL PGKGSAMRAI MEFAMKQGAE AVVFLDSDLR SVKPWWIERL AGPILKGEAD YVTPFYLRHR FDGTITNNVC FPITAVLYGK KVRQPIGGDF GVGRKLLEIY LEKPKEIWNT DVARFGIDIW MTTTAINESG RVVQAALGAK VHDVKDPGKH LKGMFLQVVG TLFELVITYE NAWKEVWKIE DVPIYGETPQ EEVPPMSIDI ENLKKLARET LEEVEYIDRS ILSEVKENGT LSLSSWIDTL YRSAVQYRKT RDKRVVENLL PFYFARTVRF AEEVKSLSDE EAEKYVYEQL DVFLEKKRLF KEEWEVENKR
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