Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1190 |
Symbol | |
ID | 5171155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1211490 |
End bp | 1212011 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640563709 |
Product | 3H domain-containing protein |
Protein accession | YP_001244780 |
Protein GI | 148270320 |
COG category | [R] General function prediction only |
COG ID | [COG1827] Predicted small molecule binding protein (contains 3H domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000368504 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACCG TTAGACAGGA AAGATTGAAG TCTATCGTAA GGATTCTCGA GAGATCAAAA GAACCCGTCA GTGGAGCTCA GCTGGCAGAA GAACTCAGTG TGAGTCGGCA GGTAATTGTC CAGGATATCG CCTACTTGAG AAGTCTTGGT TACAACATCG TGGCCACGCC AAGGGGATAC GTGCTTGCGG GTGGAAAATC CGGAGTCTCG AGGCTTGTAG CTGTGAAGCA CGCGCCAGAA GAGATAAAAG AAGAATTACT CTGTGTGGTG AGAAACGGTG GAAGAATAGT CGATGTGATT GTGGAACATC CGGTTTACGG TGAAATAAGA GGTATCATCG ATGTTTCCTC CGAGGAAGAG GTCTTGAAAT TTGTAAACTT GATGGAGATG GCAAAGACAG AACCTCTCTT AACTCTCTCT GGAGGAGTTC ATCTTCACAC CATAGAGGCA CCGGATGAAG AAACAATGGA AAGAATCATG AGAGAGCTGA AGAAAAAAGG TTTCCTGATA GAGGAGGGAT AA
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Protein sequence | MKTVRQERLK SIVRILERSK EPVSGAQLAE ELSVSRQVIV QDIAYLRSLG YNIVATPRGY VLAGGKSGVS RLVAVKHAPE EIKEELLCVV RNGGRIVDVI VEHPVYGEIR GIIDVSSEEE VLKFVNLMEM AKTEPLLTLS GGVHLHTIEA PDEETMERIM RELKKKGFLI EEG
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