Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1167 |
Symbol | |
ID | 5170325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1190313 |
End bp | 1192673 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640563686 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001244757 |
Protein GI | 148270297 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAGAA TCGACCTGAA CGGTTTTTGG AACGTCAGGG ATAATGAAGG GAGATTTTCA CTTGATGGAA CTGTGCCAGG AGTTGTTCAG GCAGACCTGG TCAGAGAAGG TCTCCTTCCA CACCCGTACG TTGGGATGAA CGAAGATCTC TTCAAAGAAA TAGAAGACAG AGAGTGGATC TACGAAAGGG AGTTCGAGTT CAAAGAAGAT TTAAAAGAAG GGGAACGTGT CGATCTTGTT TTTGAGGGTG TTGATACGTT GTCAGATGTC TATCTGAACG GTGTTTACCT TGGAAACACT GAAAACATGT TCATTGAGTA TCGCTTCGAT GTCACGAACA TATTGAGAGA AAAGAATCAC CTGGAGGTGT ACATAAAATC TCCCATCAGA GTTCCAAAAG CTCTCGAGCA GAACTACGGA GTTCTCGGCG GACCAGAAGA TCCCATTAGA GGCTACATAA GAAAAGCCCA GTACTCGTAC GGATGGGACT GGGGCGCCAG AATCGTCACA AGTGGTATAT GGAAACCCGT TTACCTCGAA GTGTACAGAG CACGTCTTCA GGATTCAACG GCTTATCTGC TGAAACTTGA GGGTAAAGAT GCCCTTGTGA GGGTGAACGG TTTCGTATAC GGGGAAGGGA ATCTCAGTGT AGAAGTCTTT GTGAACGGTG AGAAGACAGG GGAATTTCCC GTTTTCGAAA AGAACGGAGA AAGACTCTTC GATGGAGTGT TCCACCTGGA AGATGTGAGG CTCTGGTATC CGTGGAACGT GGGGGAACCG TACCTGTACG ATTTCGTCTT CGTGTTGAAA GACTCAAACG GAGAGATCTA CAGGGAAGAA AAGAAAATCG GTTTGAGAAG AGTCAGAATC ATTCAGGAGC CCGATGAAGA AGGAAAGACT TTCATATTCG AAATCAACGG TGAGAGAGTC TTCGCGAAGG GTGCCAACTG GATTCCCTCG GACAACATCC TCACGTGGTT AACAGACGAA GATTACGAAA AGCTCGTCAA AATGGCGAGG AGTGCCAACA TGAACATGCT CAGAGTCTGG GGAGGAGGTA TTTACGAGAG AGAGATCTTC TACAGGCTCT GTGATGAACT CGGTATCATG GTATGGCAGG ATTTCATGTA CGCGTGTCTT GAATATCCGG ATCATCTTCC GTGGTTCAGA AAACTCGCAA ACGAAGAAGC AAGAAAAATT GTGAAAAAAC TCAGATACCA TCCTTCCATT GTTCTCTGGT GCGGAAACAA CGAAAACAAC TGGGGATTCG ATGAATGGGG AAATATGTCC AGAAAAGTGG ATGGTATAAA TCTCGGAAAC AGGCTTTATC TTTTCGATTT TCCAAAGATC TGTACTGAAG AAGACCCATC CACTCCCTAC TGGCCGTCCA GCCCTTACGG CGGCGAAAAG GCGAACAGCG AAAAAGAAGG AGACAGACAC GTCTGGTATG TGTGGAGTGG ATGGCTGAAC TACGAGAACT ACGAAAAAGA CACCGGAAGG TTCATCAGCG AGTTTGGATT TCAAGGTGCT CCCCATCCAG AGACGATAGA GTTTTTCTCA AAACCTGAGG AAAGAGAGAT ATTCCATCCT GTCATGCTGA AGCACAACAA ACAGGTGGAA GGTCAGGAAA GGTTGATCAG GTTCATATTC GGGAATTTTG GGAAGTGTAA AGATTTCGAC AGTTTTGTGT ATCTGTCCCA GCTCAACCAG GCGGAGGCGA TCAAGTTCGG TGTTGAACAC TGGCGAAGCA GGAAGTACAA GACGGCTGGT ACTCTCTTCT GGCAGCTCAA CGACAGCTGG CCGGTTTTCA GCTGGTCCGC AGTCGATTAC TTCAAGAGGC CCAAAGCTCT CTATTATTAC GCGCGGAGAT TCTTTGCGGA AGTTCTACCC GTTTTGAAGA AGAGAGAAAG CAAAATAGAA CTTTTGGTGG TGAACGATCT GAGGGAGACG AAGGAGGTCT CTCTCAGGCT TGCGGCCTAT GAGAGGACGG GAGAAAAAGT ATTCGAGAAG ACTTACAGAA CTGTACTTCC AGCAGACGGT GTGTGTTCGG TTGATAGAAT TGAATTGCCC GATGATCTTT TCTTCTTCGT CGAGGCGGAA ATTGATGGGG TTAAATACAG AAACTACAGG GTTTTCAGAA AGTGGCGCGA TCTGGAACTT CCAGATCCGG AGATTTCGCT TGAGGACATG GGAGATTTTA TAGAATTGAC AGCGAAAAGC CCCGCTTTTG GTGTCAAGAT TCTCTCCGAT GAAGTACCTG AAGACGATTT TCTGTTCCTG GAACCGGAAA AGAGTATCAC GATAAAGAAA CCAGATGGAA TAAGAGGAGT GAAATCTCTG TATGATTATT TGAAACGATG A
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Protein sequence | MKRIDLNGFW NVRDNEGRFS LDGTVPGVVQ ADLVREGLLP HPYVGMNEDL FKEIEDREWI YEREFEFKED LKEGERVDLV FEGVDTLSDV YLNGVYLGNT ENMFIEYRFD VTNILREKNH LEVYIKSPIR VPKALEQNYG VLGGPEDPIR GYIRKAQYSY GWDWGARIVT SGIWKPVYLE VYRARLQDST AYLLKLEGKD ALVRVNGFVY GEGNLSVEVF VNGEKTGEFP VFEKNGERLF DGVFHLEDVR LWYPWNVGEP YLYDFVFVLK DSNGEIYREE KKIGLRRVRI IQEPDEEGKT FIFEINGERV FAKGANWIPS DNILTWLTDE DYEKLVKMAR SANMNMLRVW GGGIYEREIF YRLCDELGIM VWQDFMYACL EYPDHLPWFR KLANEEARKI VKKLRYHPSI VLWCGNNENN WGFDEWGNMS RKVDGINLGN RLYLFDFPKI CTEEDPSTPY WPSSPYGGEK ANSEKEGDRH VWYVWSGWLN YENYEKDTGR FISEFGFQGA PHPETIEFFS KPEEREIFHP VMLKHNKQVE GQERLIRFIF GNFGKCKDFD SFVYLSQLNQ AEAIKFGVEH WRSRKYKTAG TLFWQLNDSW PVFSWSAVDY FKRPKALYYY ARRFFAEVLP VLKKRESKIE LLVVNDLRET KEVSLRLAAY ERTGEKVFEK TYRTVLPADG VCSVDRIELP DDLFFFVEAE IDGVKYRNYR VFRKWRDLEL PDPEISLEDM GDFIELTAKS PAFGVKILSD EVPEDDFLFL EPEKSITIKK PDGIRGVKSL YDYLKR
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