| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1155 |
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| Symbol | |
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| ID | 5170173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1178328 |
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| End bp | 1180886 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563674 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001244745 |
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| Protein GI | 148270285 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCCTG AAAGACTCAC CGTTAGAAAC TTTCTTGGAC TGAAAAATGT CGATATAGAG
TTCCAGAGCG GAATAACGGT TGTAGAGGGT CCGAACGGTG CCGGAAAGTC GTCCCTCTTC
GAAGCCATTT CTTTTGCACT TTTCGGGAAC GGGATAAGGT ATCCCAACTC GTACGATTAC
GTGAACAAGA ACGCCACCGA TGGAACTGCC CGTCTCGTGT TTCAATTCGA ACGTGGAGGG
AAAAGATACG AAATCATAAG AGAGATAAAT GCCCTGCAGA GAAAACACAA CGCGAAGCTC
TCCGAGATAC TGGAAAACGG AAAGAAAGCG GCCATAGCAG CAAAACCTGC CAGCGTTAAG
CAGGAAGTGG AAAAAATTCT GGGAATAGAA CACAGAACCT TCATAAGAAC GGTTTTCCTC
CCACAGGGAG AAATAGACAA GCTTTTGACT TCTCCTCCAT CGGAGATCAC CGAGATCATC
TCCGATGTTT TCCAAAGCAA AGAAACACTC GAAAAGCTGG AAAAACTCCT CAAAGAGAAG
ATGAAAAAGT TGGAGAACGA GATATCCTCC CTGCAAGCTC TCTACGCCGC CAGCTGGAAG
TATCTGGAAG AGAACGATCT GGAAGTTCTG AAGAGCGAGC TGAAAACCGT CTCGGAGAAA
AAGAAAGAAC TTCTCAAAAA AAGAGAAGAA CTCCAGAAGG AAGAAGAGCA GCTCAAGAGG
CTCCTTGAAA AATATCGGGA ACTCGTGAAA AAGAAAGAGA GGCTCAAGGC GCTCTCTCTG
AGAAAGAACG AATTGCAAAA AGAAGTGGTC CACGAGCAGA AGGTGAAAAA AGCGAAGGAA
CTGGAACCGC TCTTTCGAGA ACTCTACCTC AGACAGAGGG AATTTGAGAG GCTCTCACAG
GATTTGAACA GCAGGGAAGA GAGATACAAA GAACTCGAAA AGAAAAAGGA AGCGATCTCA
AAAGAAATCC CTGTTCACAG GGAAAGACTT TCCAAGCTGG AGGAGATGGC AGAAAAGATC
AACGAAGAAC TGGATCTTCT TGAAAAGGTC TTGAAGGCCT CTCGGCCGCT TCTTGAGCAA
AGAATAAGAT TGAAAGAAAA TCTCATAAGG CTCGAGGAAG AGATCAGAAG ACTCGTCGGA
GAAAAAGAAA AGAGGAAAAA AGAGCTGTTT TCGATTGAAA AGACAGAGAA TGAAACGAAG
GATGAGCTGG AAAAACTGCT CGAAGAACTC TCAGTTTTGA AGAAAGACCA CATGAAATGG
CTGGCCTATC AGATAGCTTC CAGTCTGAAC GAAGGTGACA CCTGCCCTGT ATGCGGTGGA
GTGTTCCATG GAAAAGTGGA AGCCGTCGAA TTCAATGTCG ATGAACTTGA GAAGCTCGAT
CAAAAAAGAA GCGAACTGGA AAACACCTTG AACGTTCTGA AAGAGAGAAA GAAAAGCCTT
TCCAGCCTCA TAGAAGATCT TCTGATGAAA ACCGAAGAGG GGAAGAAAAA TCTGAAGAGC
ATTCGAAATC AGATTGAAAA AATTGAAGAA GAACTGCACA GATTGGGTTA TTCGGAAGAT
CTGGAGGAAA AACTGGATGA AAAAAGAAAA AAGCTTAGAA AAATAGAAGA AGAGAGGCAT
TCTATTTCCC AGAAGATCAC AGCGGCCGAC GTTCAGATTT CGCAGATCGA AAACCAGCTG
AAAGAAATAA AAGGAGAGAT CGAAGCCAAA AGGGAAACTC TGAAAGAACA GCGCGAAGAG
ATGGACCAGT TGAAAAGAGA TTTCTTCGAT CGTTTAGGGG AGATAGGAAT CGGCTTTGAA
GAGTTCAGGA TCCTCGTCAA AGAGGAAGTA AAGGACGCGG AAAAAGAATT GGGAATTGTA
GAGACGGAGA TCAGGCTTCT TGAGGGAAGC CTAAAGGAGC TCGAATCAGA GAATGTTCGA
GATGTGAGTG AAGATTACGA AAGGGTTCGA AATCAACTGG AAGCTCTCTC ACAGGAAATA
TCGGATCTTG AGAGAAAAGA AGGACGGCTC AATCATCTCA TCGAAGAAAC ACTCAGAAGA
GAGCGAGAGT TGAAGAGTCT GGAGAAGAAG CTGAAAGAGC TGAGCGATGA ATACAACAAT
CTGGATCTTC TGAGGAAATA TCTGTTCGAT AAAAGTAACT TCTCAAGATA CTTCACAGGG
AGAGTTCTCG AAGCGGTCCT GAAAAGAACG AAGGCATATC TCGACATTCT GACGAACGGA
AGGTTCGACA TAGATTTTGA CGACGAAAAA GGTGGTTTCA TCATAAAAGA TTGGGGCATC
GAAAGACCAG CGAGGGGACT TTCCGGTGGA GAAAGAGCTC TCATTTCCAT ATCTCTTGCC
ATGTCCCTTG CAGAGGTAGC CTCCGGCAGG CTGGACGCGT TCTTCATCGA TGAAGGGTTT
TCCAGTCTCG ACACGGAGAA CAAAGAGAAG ATCGCTTCCG TTTTGAAGGA ACTCGAAAGA
TTGAACAAGG TGATCGTTTT CATCACGCAC GACAGGGAGT TCTCGGAGGC TTTCGACAGG
AAGCTGAGAA TAATGGGAGG AGTTGTGGTG AATGAGTGA
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| Protein sequence | MRPERLTVRN FLGLKNVDIE FQSGITVVEG PNGAGKSSLF EAISFALFGN GIRYPNSYDY
VNKNATDGTA RLVFQFERGG KRYEIIREIN ALQRKHNAKL SEILENGKKA AIAAKPASVK
QEVEKILGIE HRTFIRTVFL PQGEIDKLLT SPPSEITEII SDVFQSKETL EKLEKLLKEK
MKKLENEISS LQALYAASWK YLEENDLEVL KSELKTVSEK KKELLKKREE LQKEEEQLKR
LLEKYRELVK KKERLKALSL RKNELQKEVV HEQKVKKAKE LEPLFRELYL RQREFERLSQ
DLNSREERYK ELEKKKEAIS KEIPVHRERL SKLEEMAEKI NEELDLLEKV LKASRPLLEQ
RIRLKENLIR LEEEIRRLVG EKEKRKKELF SIEKTENETK DELEKLLEEL SVLKKDHMKW
LAYQIASSLN EGDTCPVCGG VFHGKVEAVE FNVDELEKLD QKRSELENTL NVLKERKKSL
SSLIEDLLMK TEEGKKNLKS IRNQIEKIEE ELHRLGYSED LEEKLDEKRK KLRKIEEERH
SISQKITAAD VQISQIENQL KEIKGEIEAK RETLKEQREE MDQLKRDFFD RLGEIGIGFE
EFRILVKEEV KDAEKELGIV ETEIRLLEGS LKELESENVR DVSEDYERVR NQLEALSQEI
SDLERKEGRL NHLIEETLRR ERELKSLEKK LKELSDEYNN LDLLRKYLFD KSNFSRYFTG
RVLEAVLKRT KAYLDILTNG RFDIDFDDEK GGFIIKDWGI ERPARGLSGG ERALISISLA
MSLAEVASGR LDAFFIDEGF SSLDTENKEK IASVLKELER LNKVIVFITH DREFSEAFDR
KLRIMGGVVV NE
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