| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1061 |
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| Symbol | |
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| ID | 5170657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1088592 |
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| End bp | 1090208 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563579 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001244654 |
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| Protein GI | 148270194 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000210064 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGTG GAAATATAAG GGCAATCGTT TATCTTCCGC TGAATCCAGA AAAAGCAAAG
CAAAATAATC TTCCTGTGAA ACTACCTGTC CTCGCAGAGG ATCTTCCGAG GATACTGGAA
GAAGACAGGA TACCCCTCGA TGTCATATTG AGGGGTCTGG AAACCCAATA CGAGCTCACA
AAAGATGAAT ACTACAGATC TTACTACGTT TTCTTTCTGT ATGAAAAATT CAAGCAGCTT
CTTCGTGAAA GAAATCTCGA TGAAGCTGAG AAAGTTCTCG AAAGAGCCAG AGAAGTTCAG
TACGACTATC GCTACCATTT CTACCGTGGA CTTCTTCTTA AACACAAAGG AGAGCTCGGA
GAAGCAGAAA TCGAAATGAG GCTCGTCATT TCAATGAACG ATCGTTTCGC ACCAGCGTAT
TTTGAACTCG CTGACATACT CAAAGAAAAA AATGAGATCG AAGATAGCCT TCTCTTCTAT
GAAAAAGCCT ACGAAGTCAA CAAAGAATTT CTCTTACCGC TCCTCAAGAA GGGAGATCTC
CTTCTGGAAG AAGGAAGACT GGAAGAAGCG ATCGAGGAAT ACAAAAGAAT CCTCGAGAAA
GACCCTAATT TTGTCGAAGT CTACGAAAGA CTGGGAGTTA TCTACAATCA ACTCCAGCGA
TTCAAAGAAG CAGAGAAGTT CTTCAAAAAG GTTCTGGAAA TAGAACGAAA GGATCATGTG
GAATACAATC TCTCTTACAC CCTCATAAAA CTCGGAAAAC TCTTTGAAGC TCTCGAAATC
CTAAAGAAAC TTTATGAAAA AAATCCCGAT GATCCTCTTG TAGCTAACGA ATATGGGCTA
CTCCTCAAGA CGCTCGGACT GTACGAAGAA GCCCTCGAGG TTTTTGAGGA CGCTTACCGA
AGGCATAGAG AAGAAGAGAT TCTGAAGTAC AACTACGGAA CAATCCTGCT CCACTTTGAG
AAGGAAAAAG CCATATCCAT CCTCTCGGAA GTCTCGGATG AGCTGAAAGA TAGAGCCGAA
TTCATGATCT CACTCGCAGA AAAGGATGTG GTGATTCCTT CTCAAGAGGA ATTCGAATGG
CTGAAAGATT ACTTTTTCGA TGGCACTATC GATGTTGTTG CCCTTTCGGA AGAAATCGAT
TCAGAAGACA AGAACGTGAA AAAGCGAATA GAAAAACTCA GAGAAGGTGA GTTCCCGTTT
TACGATACCA CACTGGACTC TTCAGAAATG CTTGAGGTGA TCCTTGGTAT CATGTTCGAA
TCCCCTGATA TCTTCAAAAT GGAAGAAAAC GCCGTGAAAT TCGTCTCCGC GTTCTACGGT
AGCTCTGTGA TGATCGCCTC CACAATCGTT TTGACAAGAA TTTTCCAGTA TTTTCTCGCT
GAAGAAGAAC CTACCATGGA GGAACTTTTG AGAGAGCTGG TCGCGGAAAC TCAGGACGTG
AATTGGAAGT TTTCTCTAAG ACTCGCCAGA TTCAGGCACG CAGACAGGTT CAATTTCGAC
AGACTTTCGG ATCTTGTAAT CGCATTTCTA CAATCCATAG AACAGGGAAC ACCAGTATCG
GACGATGAAA GATTAAAATA TCTACTGGGG AAACTGACTT CTCAGAAGGA GGGATAG
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| Protein sequence | MRGGNIRAIV YLPLNPEKAK QNNLPVKLPV LAEDLPRILE EDRIPLDVIL RGLETQYELT
KDEYYRSYYV FFLYEKFKQL LRERNLDEAE KVLERAREVQ YDYRYHFYRG LLLKHKGELG
EAEIEMRLVI SMNDRFAPAY FELADILKEK NEIEDSLLFY EKAYEVNKEF LLPLLKKGDL
LLEEGRLEEA IEEYKRILEK DPNFVEVYER LGVIYNQLQR FKEAEKFFKK VLEIERKDHV
EYNLSYTLIK LGKLFEALEI LKKLYEKNPD DPLVANEYGL LLKTLGLYEE ALEVFEDAYR
RHREEEILKY NYGTILLHFE KEKAISILSE VSDELKDRAE FMISLAEKDV VIPSQEEFEW
LKDYFFDGTI DVVALSEEID SEDKNVKKRI EKLREGEFPF YDTTLDSSEM LEVILGIMFE
SPDIFKMEEN AVKFVSAFYG SSVMIASTIV LTRIFQYFLA EEEPTMEELL RELVAETQDV
NWKFSLRLAR FRHADRFNFD RLSDLVIAFL QSIEQGTPVS DDERLKYLLG KLTSQKEG
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