| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1026 |
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| Symbol | |
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| ID | 5170707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1054922 |
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| End bp | 1055611 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563544 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001244620 |
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| Protein GI | 148270160 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGATTGA AAGAAAACCT CGAAAGGGTT CTCAACAGAA TGAAAAACGC TGCTCTTCGA
GCAAACAGGG ATCCCTTCGA AGTGAGGCTC GTAGTCGCTT CAAAATACGC CAGCGTCCAG
CAGATGGAAG AACTCGTGTT CCTTGGTATC AGAGAGTTCG GAGAAAACAG AGCGCAGGAT
CTCGTCAAAA AGAGCGAATA TTTCAAGGGC AAACCCATCA TCTGGCACTT CATTGGAAGA
ATACAGACGA ACAAGGTGAA ATACATCGTA CCGAGATGTG AACTGATCCA CTCCGTCTGG
AGGGAAGAGG AGCTGAAAGA AATAGAAAAA AGGGCAGAAA AACTTGGGAA AATCCAGAAG
ATTCTCCTTG AGGTGAACGT CTTCAAAGAA GAAACGAAGG CCGGGCTTCT GGTCGAAGAA
GTGGAAGAGT TCTTGAAACT CTGTCAGGAA TTCCCACACG TCGAAGTTCT CGGCTTTATG
ACCATGGCTC CCTACGCTGA AAACCCCGAA GAAGTTCGGT GGGGTTTCAG AACTCTCAGA
GAGCTAAGGG ACGAGCTCGC CAGCAGGTTC AACGGGAACG TGAAACTCAA GGAGCTTTCC
ATGGGCATGA GCAACGATTT CGAAGTAGCG ATAGAAGAAG GAGCAACCAT GGTGAGGATT
GGAAGCGCCA TATTCGAAGG AGGGAAGTGA
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| Protein sequence | MGLKENLERV LNRMKNAALR ANRDPFEVRL VVASKYASVQ QMEELVFLGI REFGENRAQD
LVKKSEYFKG KPIIWHFIGR IQTNKVKYIV PRCELIHSVW REEELKEIEK RAEKLGKIQK
ILLEVNVFKE ETKAGLLVEE VEEFLKLCQE FPHVEVLGFM TMAPYAENPE EVRWGFRTLR
ELRDELASRF NGNVKLKELS MGMSNDFEVA IEEGATMVRI GSAIFEGGK
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