Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0859 |
Symbol | |
ID | 5171149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 876533 |
End bp | 877273 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640563378 |
Product | transcriptional regulator IclR-like protein |
Protein accession | YP_001244454 |
Protein GI | 148269994 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATACCC TCAAAAAAGC CTTTGAAATA CTGGATTTCA TCGTAAAGAA TCCTGGCGAT GTAAGTGTTT CTGAAATAGC CGAAAAGTTC AATATGAGCG TTTCAAACGC ATACAAATAC ATGATCGTTC TCGAAGAGAA AGGGTTTGTT CTCAGAAAAA AAGACAAGAG ATACGTACCG GGGTACAAAT TGATAGAGTA CGGTTCATTC GTTCTGAGGC GCTTCAACAT TAGGGATATA GCTCACGACC ATCTCGTGGA TATCATGAAA AGAACGGGGG AAACAGTACA CCTGATTTTG AAAGATGGCT TCGAGGGAGT TTACATAGAC AAGGTGGAGG GTGAGCAGAG CATTCCTATG GTCTCAAGAC TTGGTATGAA AGTCGACCTT TACTCCACAG CCTCTGGTAA ATCCATTCTC GCCTTCGTTC CCGAAAAAGA ATTGAAGGAA TACCTGAAAA TTGTGGAACT AAAACCAAAA ACCCCAAACA CCATCACGAA TCCCAGAGTA CTGAAGAGAG AGCTTGAAAA AATTAGAAAG CGAGGATACG CCGTAGACAA CGAAGAAAAC GAAATAGGTA TCATGTGTGT GGGAGTTCCT ATATTTGATC ACAACGGATA TCCGGTGGCT GGAGTGAGTA TTTCCGGGGT TGCACGAAAG TTCACAGAGG AAAAAATAGA AGAATACTCC GATGTACTCA AAGAAAAGGC AGAAGAAATA TCCAGAAAAC TTGGATATTG A
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Protein sequence | MNTLKKAFEI LDFIVKNPGD VSVSEIAEKF NMSVSNAYKY MIVLEEKGFV LRKKDKRYVP GYKLIEYGSF VLRRFNIRDI AHDHLVDIMK RTGETVHLIL KDGFEGVYID KVEGEQSIPM VSRLGMKVDL YSTASGKSIL AFVPEKELKE YLKIVELKPK TPNTITNPRV LKRELEKIRK RGYAVDNEEN EIGIMCVGVP IFDHNGYPVA GVSISGVARK FTEEKIEEYS DVLKEKAEEI SRKLGY
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