| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0727 |
|---|
| Symbol | |
|---|
| ID | 5171140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 733058 |
|---|
| End bp | 733972 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640563234 |
|---|
| Product | PP-loop domain-containing protein |
|---|
| Protein accession | YP_001244323 |
|---|
| Protein GI | 148269863 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR00269] conserved hypothetical protein TIGR00269 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000064129 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGTA CCAAGTGTGG AAAACCCGCC TCGGTTAAGT TGAGACACTA CAACATAAAG
CTCTGCAAAG AACACTTCAA CGAATTCATA GAACAAAGGG TGGAGAAAGC GATAAAAAAG
TTCAAAATGT TCGGCAGAAA TTCGAAAATA TTGATAGCTG TTTCCGGTGG AAAGGACAGT
GTTTCCCTGT GGCACATGTT GAAAAAACTT GGCTACGAGG TGGACGCACT GTTCATCAGA
GCCGGAAAAA GCGGAATGGT CCAGAAAGCT CAGGAAATCG TTGAAAAAAA CGCAGAGCTT
CTCAACACTA AACTTCACAT AGTCGATGCA ACGGAATACT TCGGAGGCCT TTCCACTCAG
GAAATCTCCA TTATGTTGAG GAGACCTGTT TGTTCTATTT GTGGGGTCGT GAGAAGGTAT
CTCATGAACA AATTTGCCTA CGAAAACGGT TACGATGTGG TGGTCACGGG GCACAACCTG
AACGATGAAG CGTCCGTTTT GCTGGGAAAC ATCCTTCACT GGCAGGAAGG ATATCTGGAG
AGGCAGTGGC CGCTCCTTCC AAAAACCCAT GAAAAACTCG TTCCAAAGGC CAAACCACTC
GTTTTGAACT ACGAAGAAGA CATAAAACTG TACGCAACTC TGAACGAGAT ACCACACCTC
GAGATGGCCT GTCCATTCTC CGTGGGAGCA ACTTCACTCG TATACAAAAA GATCCTGCGG
GAACTCGAAG AAGAACAACC CGGAATCACG CTGAATTTCT ATCTTGGGTT TTTGAAAAGA
AAAAAAGAGC CAAAATTCGA AGTGGAAGGA CTCAGGGAAT GCAAAGAATG TGGTTATCCA
ACGACGGCAG AGGTGTGTTC CTTCTGCAGA CTCAGAAAAC AGGTAGAGAA AAGAAAAAAC
AAGGCCCCCG CATGA
|
|---|
| Protein sequence | MKCTKCGKPA SVKLRHYNIK LCKEHFNEFI EQRVEKAIKK FKMFGRNSKI LIAVSGGKDS
VSLWHMLKKL GYEVDALFIR AGKSGMVQKA QEIVEKNAEL LNTKLHIVDA TEYFGGLSTQ
EISIMLRRPV CSICGVVRRY LMNKFAYENG YDVVVTGHNL NDEASVLLGN ILHWQEGYLE
RQWPLLPKTH EKLVPKAKPL VLNYEEDIKL YATLNEIPHL EMACPFSVGA TSLVYKKILR
ELEEEQPGIT LNFYLGFLKR KKEPKFEVEG LRECKECGYP TTAEVCSFCR LRKQVEKRKN
KAPA
|
|---|
| |