| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0707 |
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| Symbol | |
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| ID | 5171246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 710086 |
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| End bp | 712104 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563214 |
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| Product | glycine--tRNA ligase |
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| Protein accession | YP_001244303 |
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| Protein GI | 148269843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACAG CCCTGCTTGA AGTGGGACTC GAAGAACTTC CCGCGAGCGA ATTCCACAGT
ATTCTGAAAC AGCTCGAGGA AAGGTCGACT GAACTTCTCA AAGCGTACAG AATTTCTTCC
GGATCTGCTG AAGTCTTCGT TGGAAGCAGA CGTTTTGGTG TGATTCTCAA GAATCTCCCG
GAGAGACAGG AGGATTTTAC AGAAGAGAAG AAAGGTCCAC CACTGAACGT TGCCTACGAT
GAAAACGGTA AACCGACCAA AGCGCTCGAA GGGTTTTTGA GGAACAACAA CGCTTCCCTG
GAGAACGTGG TTCACAGGGA GGGGTACATC TATTTATCGC GAGTTGTTGA AGGAAAGCCT
GTCGAAGAAG TTCTCCCAGA TCTGTTCAGA GATCTCGTTC TTGGTTTGAA TTTCAGGAAA
CCCATGAGAT GGGGTTCCGG TGAACACGAA TACATCAGAC CTGTTCACTG GATTGTGGCG
ATGGTTGATG GAAGAGTTCT TGACCTAGAA ATCTTCGGTC TTAGATCGTC CAGAATCTCT
TACGGCAAAA GGTATCACGC TGGATCGATC AAAATTCCAG ATCCGGAAAG GTACTACGAA
TCTCTCAAAA AGGGATTCGT GATTTCTTCC CATCTGGAGA GAAAAAAATT CGTCCTCGAA
CAGATCGATG AATTTGAAAA GAGAAGTGGT ATGAAGATTG AACGCGATGA AGAACTCATC
GAAGAGATAG TGGCGATAAC GGAGTATCCC AGAATCGTTG TTGGGCAGTT CGACCGAAAA
TATCTCGAAC TTCCAGAAGA GATTATAGTG ACCGCCGTGA AACATCACCA GCGCTCTTTT
ATAGCACATA AAGAGACCCT GACGAACACC TTTGTGGCTT TTCAAGACGG TCCACAGCCA
CCGGAGAACG TGGTTAAGGG ATACGAGAGA GTCATAAACG CTCGATTGGA AGACGCGCGA
TACTACTTCC AGAAGGATCT CGAGACTCCG CTGGAAAAGA TGAATGAAAA GCTCAAAGAA
ATCGTTTTTC AGGAGAAACT CGGAACACTC TACGACAAGG TGGAAAGGAT AAAGAAAATA
TCAGAGAGGC TATGCGAAGA TCTGAAACTT CCAGAGTCGT TCACGCAGAA GGTCCTGGAA
GCCGCTTCTA TATGCAAAGC AGACATCGCT TCGAAGGTGG TCTACGAGTT CCCGGAGCTA
CAGGGCGTTA TGGGCAGGAT CTATGCCCTG AGAGAGGGAA TAAACGAAGA AATAGCAACG
GCCATAGAGG ATCATTACTC CGAAGAGCCA CAGACAGTGA TAGGTTCCAT TCTTGGAATA
GCGGATAGAA TCGACACCAT TGTGGGAAAT TTCGCCATAG GCAACGTTCC CACGAGTTCT
AAAGATCCGT ATGGTCTGAA AAACAAGGCT GACGCGATCT TCAGGATCAT AAGGAAAAAC
GAGTGGGATA TTTCTCTGGA AGAGCTCCTC ACTTTCGCTT CTTCACTGGT GGGGTACCGT
CTTTCTGAAG AATTGGAAAC GTTCTTTGCG GGCAGGTTCT ATCAGTTTCT GGTCAACGAA
CTTGGAATAT CTTTCGACGT GGCAAGAGCG GTGAATCACC TGTGGAAGAG ACCCCTTCGC
GGGATCCTCT CTGCGGAAGC CCTCCAGGAG ATATCTGAAA AACCCGAGTT TCAAGACCTG
TTTGTTGGAT TTGAGCGAGT CCACAACATA ACGAAGAATC ACGACTCTGT CAGATTCGAC
GGAGCCCTCT TTGAGAAAGA AGAAGAGAAA AAATTGATGA ACAAGTTCTA CGAAGTCAAA
GAAAAAGTTT TGAAAGCTCT GGAGAGGTTG AATTACCGCG AGGCACTTCA ATATCTGATC
GAACTGAAAC CCTACATAGA CGAGTACTTC GACAACGTCT TTGTGATGGT GAAGAGGGAC
GACTTGAGAG TGAACAGGCT GGGCTTTCTG AAAAACATCG ACGAACTCTT CATGATGGTA
GGAGACATGA CTTACTTAGT CAAGAGATCT CAGGTATAG
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| Protein sequence | MRTALLEVGL EELPASEFHS ILKQLEERST ELLKAYRISS GSAEVFVGSR RFGVILKNLP
ERQEDFTEEK KGPPLNVAYD ENGKPTKALE GFLRNNNASL ENVVHREGYI YLSRVVEGKP
VEEVLPDLFR DLVLGLNFRK PMRWGSGEHE YIRPVHWIVA MVDGRVLDLE IFGLRSSRIS
YGKRYHAGSI KIPDPERYYE SLKKGFVISS HLERKKFVLE QIDEFEKRSG MKIERDEELI
EEIVAITEYP RIVVGQFDRK YLELPEEIIV TAVKHHQRSF IAHKETLTNT FVAFQDGPQP
PENVVKGYER VINARLEDAR YYFQKDLETP LEKMNEKLKE IVFQEKLGTL YDKVERIKKI
SERLCEDLKL PESFTQKVLE AASICKADIA SKVVYEFPEL QGVMGRIYAL REGINEEIAT
AIEDHYSEEP QTVIGSILGI ADRIDTIVGN FAIGNVPTSS KDPYGLKNKA DAIFRIIRKN
EWDISLEELL TFASSLVGYR LSEELETFFA GRFYQFLVNE LGISFDVARA VNHLWKRPLR
GILSAEALQE ISEKPEFQDL FVGFERVHNI TKNHDSVRFD GALFEKEEEK KLMNKFYEVK
EKVLKALERL NYREALQYLI ELKPYIDEYF DNVFVMVKRD DLRVNRLGFL KNIDELFMMV
GDMTYLVKRS QV
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