Gene Tpet_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0646 
Symbol 
ID5170920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp650751 
End bp651731 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content47% 
IMG OID640563153 
ProductABC-type sugar transport system periplasmic component-like protein 
Protein accessionYP_001244242 
Protein GI148269782 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0353327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGATT TTATCCCACA GGTTCTGGAA GAATCTGGAA AATGGCAAGG GAAACTCATA 
GGCCTTCCGT TCTACAACAA CACAATGCTC TTCTATTACA GAAAAGATCT CTTTGAAGAT 
CCAAAGATAA AACAAGCGTT CAAGGAAAAA TACGGTAGAG AACTCACCCT CCCGACCACC 
TGGGAAGAAG TTGTAGAAAT AGCGGAATTC TTCACCAAAA AATACAACAA GAGCTCTCCA 
ACAGACTACG GAATCGCCCT CATGTTCCCG AGAACCCACA CACTCTTCTA CATGTATCTG 
CTGTTTTTCG GTGAGTACAG GAACGCACCA CTCGGTATCA TGAGGCACGG AACTGCGGAT 
CTTGAATTCG GTGAGTATTT CACAGCGGAT CACAAACCAG CCTTCAACAG CGAAGAAGGA 
TTGAAAGCAC TTGAAATGAT GAAAAAACTC ATGCCTTACA GTCCAGATCC ACTCGGTTCT 
GATTACGGTG AAACGATTGA GTACTTCAAC CAGGGACTCG TTGCTATGGT ACCTCAATGG 
ACGGGACCGT ATCTGATCTT CAAGAACACA CTCGGGGAAG ACAAAGTTGG AATCATACCT 
ATGCCCGGTC GGTCTGTGAG CGGTCAATGG GCACTTGGCA TCAACAAGTT CATACCTGAA 
GACAAGAAGC TCGCTGCGTT CAAATTCATC ATTTTCGCCA CCAGCAAATG GGCTGACAAG 
AACAAATTCC TGAGATTCGC GGTTGCACCG GCGAGGATAT CGACACTCAA GGATCCAGAA 
GTGAGAGCGG CCGATCCCAG AGTACCAGCC CTCGAAGTGA CTTACGTTAC ACAGACCCAC 
AGACCAAGAA TACCGGAGGA ACCAAGACTC GAAGACATCA CCGTTGAGAC CTTCTCCAAG 
ATCCTCTCCG AAGAACTCCC GCTCTCCATG GAAACCCTGA ACGATCTCGC AAAGAAGTGG 
GAAGAGATTC TTGGAAAATA A
 
Protein sequence
MNDFIPQVLE ESGKWQGKLI GLPFYNNTML FYYRKDLFED PKIKQAFKEK YGRELTLPTT 
WEEVVEIAEF FTKKYNKSSP TDYGIALMFP RTHTLFYMYL LFFGEYRNAP LGIMRHGTAD 
LEFGEYFTAD HKPAFNSEEG LKALEMMKKL MPYSPDPLGS DYGETIEYFN QGLVAMVPQW 
TGPYLIFKNT LGEDKVGIIP MPGRSVSGQW ALGINKFIPE DKKLAAFKFI IFATSKWADK 
NKFLRFAVAP ARISTLKDPE VRAADPRVPA LEVTYVTQTH RPRIPEEPRL EDITVETFSK 
ILSEELPLSM ETLNDLAKKW EEILGK