| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0390 |
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| Symbol | |
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| ID | 5170974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 378579 |
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| End bp | 380318 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640562891 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001243992 |
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| Protein GI | 148269532 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGGT TTCTTGGGAT TTTCCTTATG ATTGCAGCCG TTGCACTTTT CGCAGAACTT
TCACCGTTCG CTCAGTTCGA AACGTACATC GGAGCAGAGT TCACAGGACA GTACGGGGGA
GTGCTCGTAG TACCGACGCT TTCTGGTCCC AGAACGTGTA ACTATGTCGT GGCTCAGGAG
ACGAGCTCCA CAGATGTTAT AGCGAGGTTC ATGGCTTCCA TGATCGAGCT CGACAATCAC
GCGAGGATCC ATCCCGCTCT TGCAGAAAGC TGGGAACTCA TCCAAAACGA GGACGGAAGC
ATGGAAATCG TTTGGCACCT GAGGAAGGGT GTCAAATGGA GTGACGGAAC ACCGTTCACA
GCAGACGATG TGGTCTTCAC AATTAACGAT GTCTATTTCA ACCCTGACAT ACCGAACGAT
ATGCAGGATC TCTTTGCAGA CAACTGGCCA GTAGCCGAAA AGCTCGACGA TTACACGGTG
AAAACCACTC TCAAAGAAAC GTACAGACTC GCGGTAAGGT ACATTGGAGG TATTCCCATC
TTCCCAAAAC ACCTCGCGGA ACCGTACGTG AAGGAAGGAA AATTCAAGGA ATTCTGGACG
GTTGACGCCA TCAACAAGGG AGAAATCGTA GGACTTGGTC CGTTCATTCC GGTTGAGTAC
GTTCCCGATC AGTACGTGAG ATTCGTGAAG AACCCCTACT ACTGGAAGTA CGACAAAGAA
GGAAAGCAGC TTCCTTATCT CGACGGTATC ATCTTCAAGA TCATTCCGAC ACAGGATGCG
CAGAGACTCG CGTTTGAAAA CGGAGAAGTC GATGTGTATG GACCTCGCGG AACAGAGTAC
GCAGAACTCA AAGCCATGGC AAGAGAAAAA GGCTGGGTTG TGGGTATTGG AGGCCCGAAT
TTTGGAACCA CTTTCATCAC TTTCAACTGG AACGCTCCCG ATCCTGTGAA GCGGAAGTGG
TTCAGGAACG ATTTCTTCAG AAGAGCTGTG GCGTACGCCA TCGACAAACA ATCCATGATA
GACACGCTCT ACAACGGCCT CGCGGTTGAA CAGTGGGGTC CCATCAGTCA GGCTGCGACC
GTTTATTACG ACGAATCCGT TCTCAGAAAA TACCCGTACA ACCTTGATCT CGCCAGAACG
ATGCTCAAGC TCGGTGGTTT CAAATGGGAT GAAAACGGCC AGCTCCTCGA CAGCGAAGGA
AACCCGGTGA AGTTCATCAT CATGACTAAC GCCGGACACC AGATCCGCGA AGGAATGGGT
AACATCATAA CAGAAGCGCT CAAAAAACTC GGAATGGATG TCACCTTTGC TCCCATCGAT
TTCAACACGC TCGTCCAGAA GCTCGTTGTG AACGGTGACT GGGAATCTAT CATTATAGGA
CTCACCGGAT CCGATGAACC TCAGGGAGGA GCCAACGTCT GGAGAATCAA GGGATCTCTC
CACTTCTGGA ACTACCATCC GGAGGTCAAA GACTTCGTCG ATCCCAACGA TTACTACCTG
CCAGACTGGG AAAAAGAGAT CGACAGAATC TTCGAAGAGA ACGTGAAGAT ACTCGATCAG
CAGAAAGTCG TAGATATGTT CAGAGAATTT CAGAGGCTCG TGTCTGAACA CATACCGCTC
ATCTACACCA CCCAGCAGCT CTATCTCTAC GCCTACAGCA ACAAACTTCA CAACGTGGAA
CCCACCGCTT TCGGCGGTGT GTGGGGTTGG AACCAGGATT GTGTCTGGAA AGAGCAGTAA
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| Protein sequence | MRRFLGIFLM IAAVALFAEL SPFAQFETYI GAEFTGQYGG VLVVPTLSGP RTCNYVVAQE
TSSTDVIARF MASMIELDNH ARIHPALAES WELIQNEDGS MEIVWHLRKG VKWSDGTPFT
ADDVVFTIND VYFNPDIPND MQDLFADNWP VAEKLDDYTV KTTLKETYRL AVRYIGGIPI
FPKHLAEPYV KEGKFKEFWT VDAINKGEIV GLGPFIPVEY VPDQYVRFVK NPYYWKYDKE
GKQLPYLDGI IFKIIPTQDA QRLAFENGEV DVYGPRGTEY AELKAMAREK GWVVGIGGPN
FGTTFITFNW NAPDPVKRKW FRNDFFRRAV AYAIDKQSMI DTLYNGLAVE QWGPISQAAT
VYYDESVLRK YPYNLDLART MLKLGGFKWD ENGQLLDSEG NPVKFIIMTN AGHQIREGMG
NIITEALKKL GMDVTFAPID FNTLVQKLVV NGDWESIIIG LTGSDEPQGG ANVWRIKGSL
HFWNYHPEVK DFVDPNDYYL PDWEKEIDRI FEENVKILDQ QKVVDMFREF QRLVSEHIPL
IYTTQQLYLY AYSNKLHNVE PTAFGGVWGW NQDCVWKEQ
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