| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0110 |
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| Symbol | |
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| ID | 5171435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 103049 |
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| End bp | 105073 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640562611 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001243715 |
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| Protein GI | 148269255 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.384036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGGT ACTTCTTCAC CACAATATAC GTGGTGCTGG TTTTCCTTTC GTTCCTTGTT
GTTTTTTCTC TTGGAAAGAT AGAGACCGGT CCTGAGGTGT TCCTTCCGGG TTACAATGGA
GATCCTGAAA AGACCACGAA CGAAAACGTG AAGAACCTCT TTCGTGTGAA CAGGGAGTTC
GGCGGAAGTT CCTCGATTGT GATCGTTGTC GAAGGTGATA AGAACTTCTT CGAAGACGCA
AGGGCTCTGT ACGAACTCCA CGAGGCTCTG GAAAAAAGAG AAGACATCTC GAGTGTTATG
AGTCCCGTGA ACCTTCCAAG GTTTTCTGGT TTCAGAATGG ACTATTACTT CAAAGATGGG
AAAATTTCAA ACGACGTTTT GAATGACCCG AACGCGAAGA GTTTCATCAC AGAAGATGGG
AAGTACGCGC TTTTGAACGT GATATTCAAA GAAGGTGTCA ACGCAAGGGA CAAAATACCC
GAGATAAAAA GTCTCGTGTC CGGCTACTTC GAGAAAAATT ACCTGTTTGG TGAACCAGTG
ATAGACAGCG CTCTTTTCAA AGAGCTGGTG AGGCAGACTT TCGTTTATCC TATTTTCATG
TTTCTTGTGA TCTTTCTTCT CTTCTACTAC CAGCTGAGAT CCTTCAGAGC AGCGCTCTTT
TCTTTGATGG TTCCTGTGCT GTCCACGTTT TTTGTGTTCG CTGTGTTTTT CGCTATGGGA
AAGAGCCTCA ACACCATGAC CGTGATGACC ATCACCTTTC TCCTCATCAT CGGCTCTGCG
TACGGGCTTC ACTTCTACAA CGCGCTGTTC AGGTTCAGTG AAAAAAAAGA GGCGGTAAAA
CACATCTTCA AACCCATACT TTTTTCGATG CTCACCACCG CAGCGGGATT CATGTCTTTC
GTCTTCATCG ATATAAGGGC GTTCAGAGAA CTCGGAATTC TGGTTTCTTC CGGACTCGCT
GTTGTGGTTC TTGTGATATT CACATCCGGT GTGGAGATCT TCAGAAACTA CACTCCAAAG
AGAACTCCAA GGAGCTTTGG AATGAAGTAC GTGGGAAGAA AGATCGCTTT GATCGTTCTC
GTTGTTTTCC TGGTGATGGC GGCTCTTTCA CCGTTTCTGC TCAAAAGAGT ACAGGTGGGT
TCAGATATGG TGTCCTATTT TGAGAGGGAT TCCGAACTCA GAAAAGCTTA CGACCTCATC
GTGGAAAAGT TCAACACGAG AGAGCCGATC TATCTGGTGC TGGAGAAAAC TGTTCCATTC
GTTGGAACGG ATTCCAAGAC CTTGAAAGAG CTAATCGAAA AGATAGAAAA GAGCGAGTAC
GTCTCCAGTG TGGTGTTTCC TGTGGATATT CCCGTTCCGA TAATGTACGC GCTCTCCAGA
ACGAACCCGT TTCTCAAGAC CTTCATCGGA GATAGAAACA GGATAAGGTT GATCGTCAAT
CTCACACCGG AAGGATACGA ACATGTGAAA AAAGTGGTAG ATCTGATCAA CAAAGTGATG
AGCGAAACGG GCTGGTCACA CTATGTGGCG GGATCCGTTC TGATCTGGGA CGATATCAAC
GAAAGCATCA TGAAATCACA GATACAGAGC ATCGTCATTG CTTCAGTTCT GATCTTTGCC
ATGGTCTTCA TCATATTCCG AAGACCGCTC ACCACACTCA GTGTGATGGT TCCAATCGCT
TTCACGACGG TGTTCAACTT CCTGTTCATG GCCCTCTTTG GGATCAGTCT GGATGTGTCA
ACATCGATCA CCTCCGGTAT TCTCATGGGT CTTGTGATAG ATTATTCCAT TCACATTGCT
TCGGAAGAGA AGAGGCTGAG AGATCCGTAC CTTGTGGTCA AGAACGTGGG ACCATCTGTT
CTCACAAACG CGCTGGGATT GATCTCGGGA TTCGCCGTTC TTCTCTTCTC TGAACTCGCA
CTCTTTAAAA ACATATCTCT GCTTATGATG CTCGGAATAG GTGTTGGGGC CGTTTTCACG
CTGATCGTCC AGCCGATGAT ACTGGAAAAG AGGGAAAACT CTTGA
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| Protein sequence | MRRYFFTTIY VVLVFLSFLV VFSLGKIETG PEVFLPGYNG DPEKTTNENV KNLFRVNREF
GGSSSIVIVV EGDKNFFEDA RALYELHEAL EKREDISSVM SPVNLPRFSG FRMDYYFKDG
KISNDVLNDP NAKSFITEDG KYALLNVIFK EGVNARDKIP EIKSLVSGYF EKNYLFGEPV
IDSALFKELV RQTFVYPIFM FLVIFLLFYY QLRSFRAALF SLMVPVLSTF FVFAVFFAMG
KSLNTMTVMT ITFLLIIGSA YGLHFYNALF RFSEKKEAVK HIFKPILFSM LTTAAGFMSF
VFIDIRAFRE LGILVSSGLA VVVLVIFTSG VEIFRNYTPK RTPRSFGMKY VGRKIALIVL
VVFLVMAALS PFLLKRVQVG SDMVSYFERD SELRKAYDLI VEKFNTREPI YLVLEKTVPF
VGTDSKTLKE LIEKIEKSEY VSSVVFPVDI PVPIMYALSR TNPFLKTFIG DRNRIRLIVN
LTPEGYEHVK KVVDLINKVM SETGWSHYVA GSVLIWDDIN ESIMKSQIQS IVIASVLIFA
MVFIIFRRPL TTLSVMVPIA FTTVFNFLFM ALFGISLDVS TSITSGILMG LVIDYSIHIA
SEEKRLRDPY LVVKNVGPSV LTNALGLISG FAVLLFSELA LFKNISLLMM LGIGVGAVFT
LIVQPMILEK RENS
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