| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0076 |
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| Symbol | |
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| ID | 5171479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 68880 |
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| End bp | 69896 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640562575 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_001243681 |
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| Protein GI | 148269221 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000666316 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGGC TCAACAGGAA GAACAGTGAT GCTTCGAAAA AATTGAATGA TCGCCAGAGA
AAGGTGCTTT ACTGCATCGT GAGAGAGTAC ATAGAAAACA AAAAACCCGT GAGCTCACAG
AGAGTTCTGG AAGTGAGCAA CATAGAGTTC AGCAGTGCCA CTATAAGAAA CGATATGAAA
AAACTGGAAT ATCTTGGATA CATATACCAG CCCCACACAT CAGCAGGTAG GATTCCAACT
GACAAGGGGC TGAGGTTTTA CTACGAGGAG ATGTTGAAAA TCTCAAAAGA GACATCAGAA
GCAGATCTTG CTGTGGAGAC TTTCAAATCG ATGCCCCTAG CTGATCCAGA AAAAGTTCTC
TTCCTCGCGG GAAATCTCTT AGCCCGATTG ACGGAGGGTT ACGTCCTCAT AGAAAGACCA
AACACCAGAG ATTTGAAAAT ACTCAGGGTG ATGCTCATTC CCGTTTCGGA GGATTACCTC
ATCTTTTCCA TATTGACGGA GTTCGGTGTT TCCAGAGTTA CTCCCATCAA AACTCAGGAA
CGACTGAATT GGGAAGAAAT CGAAAGACAA CTCAATTTCC TCCTCAGAGG CAAAACAATA
GGAGAAGTAT TGTTGGGTAG AATAGAAAGC CTGAAAGGGA GTGGATTCCT CAGACTGATA
GAATCTCTAA TAGGCGAGAC CATCGAAAGA TATCTGGATG CAGGTCTTGA AAACCTTCTA
AAAGACGAGA CACTCGCTCT GGAAGACATC AGAAACCTTC TTGAAGAGAT CAAAGATCAG
AAATTTCTTG AGAGCTTAGT TGGAGAAGGC ATAAGCGTCA TGATAGGAAG GGAAATTGGC
AGAAAAAATC TGGAGAAATT CGCTGTTTTT TCAGGAAGAT ACTTCAAAGG AGAATCTCCT
ATCGGTAGTG TGTACTTCTT CACGTCGAAG GTTACAAGGT ACGATAGAAA TCACAAAATA
TTTGAGTACA TTTTGAACCG TCTTTCGGAG TATTTCACTT CGACCTCCAG GAGGTGA
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| Protein sequence | MRRLNRKNSD ASKKLNDRQR KVLYCIVREY IENKKPVSSQ RVLEVSNIEF SSATIRNDMK
KLEYLGYIYQ PHTSAGRIPT DKGLRFYYEE MLKISKETSE ADLAVETFKS MPLADPEKVL
FLAGNLLARL TEGYVLIERP NTRDLKILRV MLIPVSEDYL IFSILTEFGV SRVTPIKTQE
RLNWEEIERQ LNFLLRGKTI GEVLLGRIES LKGSGFLRLI ESLIGETIER YLDAGLENLL
KDETLALEDI RNLLEEIKDQ KFLESLVGEG ISVMIGREIG RKNLEKFAVF SGRYFKGESP
IGSVYFFTSK VTRYDRNHKI FEYILNRLSE YFTSTSRR
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