Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1659 |
Symbol | |
ID | 4601736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1605657 |
End bp | 1606823 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639774432 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_921057 |
Protein GI | 119720562 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.661585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGTGTT CTACGCTCTC GGGGGTGTCG GCTTTGGATC CAGAGAAGGT TGTTGAAGCC GCTTTGCGGG AGCCAACAGA GGAGTTGCTC ACGCCGGACA GGCTGAAGAG CTTGGTCGAA AACGGAGTGC CACTGGTGCA CTATATAGGC TTCGAGATCT CCGGGCTCGT CCACCTCGGT ACCGGGCTTA TCTCCATGCA GAAAGTGGCG GACCTCCAGA GCGTCGGCGT GAAGACTAAG GTGTTCCTGG CGGACTACCA CAGCTGGATC AACAGGAAGC TTGGAGGGGA CCTCGACGTG ATAAGGAGGG TTGCCGGCGG CTACTTCAAG GAGGCCTTGA GGGTTTCGCT GAGGATAGTG GGGGGAGACC CCGACAAAAC GGAGTTCATC CTCGGGTCGG AGCTCTACGA GAAGCTTGGA CTAGACTACT TCACGAACGT GCTGAGGGTT TCCATGGAGA CGACACTGTC GCGCGTCAGG AGGTCTGTAA CCATCCTCGG GAGGTCGGAG TCGGAGGCGC TTAGCTTCGC ACAGCTACTC TACGTGCCCA TGCAGGTGGC GGACATCTTC AGCATGGGCG TCAACATACC GCACGGCGGC ATGGATCAGA GGAAAGCCCA CGTTATAGCG ATCGAGGTCG GAGAAAAGCT GTTCGGGTAC AAGCCCGTAG CCCTCCATCA CCACCTCCTC CCGGGGCTCC AGCTCGACGC CAGCGACTGG AAGAAGCTCG TAGAGGCGAA GAACTCCGGG GACAAGGAGC TCTTCCGCGA GACCCTCGTG AACATTAAGA TGTCGAAGTC GAAGCCCGAG ACCGCGCTAT TCATACACGA CTCCGAGGAG GAAATCAGGA GCAAGATAGG CAGGGCATTC TGCCCCGCGG GCGAGGTCGA GATGAACCCC CTGCTCGAGA TAGCTAGGTA CATAGTCTTC AGGAACAGGA AGGAGCCCTT CGAGGTTGTA AACAAGAAGA CAGGGGAGAG GAGGGCTTTC AACACGTACG GCGAGCTCGA GGAAGCCTTC CGGGAGAGGC TCGTGCACCC GGCGGACCTA AAGGAGGCTT TATCGCGCGA GCTGGCCGAG ATACTGGCGC CCGCGAGGAA GCACTTCACC GAGGGGCCCG GCAGGAGCTT CCTGGAGGAG ATAAAGGAGC TGAGGATAAC GAGGTAG
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Protein sequence | MLCSTLSGVS ALDPEKVVEA ALREPTEELL TPDRLKSLVE NGVPLVHYIG FEISGLVHLG TGLISMQKVA DLQSVGVKTK VFLADYHSWI NRKLGGDLDV IRRVAGGYFK EALRVSLRIV GGDPDKTEFI LGSELYEKLG LDYFTNVLRV SMETTLSRVR RSVTILGRSE SEALSFAQLL YVPMQVADIF SMGVNIPHGG MDQRKAHVIA IEVGEKLFGY KPVALHHHLL PGLQLDASDW KKLVEAKNSG DKELFRETLV NIKMSKSKPE TALFIHDSEE EIRSKIGRAF CPAGEVEMNP LLEIARYIVF RNRKEPFEVV NKKTGERRAF NTYGELEEAF RERLVHPADL KEALSRELAE ILAPARKHFT EGPGRSFLEE IKELRITR
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