| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1458 |
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| Symbol | |
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| ID | 4600584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1410335 |
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| End bp | 1412269 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639774233 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_920858 |
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| Protein GI | 119720363 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.628846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTACAGGG TTCTAGGCTT CAGGGACGAC GTCTACCTCG GCAGGGTTGT GAAGGCGGAG
TTCAGCGCCC CGAGGGAGGG GGAGTACGCC TACCTGCTCG GCAACTTCAA CGCGTTTAAC
GAGGGAAGCT TCAGGATGCG GGGCGCGGGC GACAGGTGGG TCGTCGAGGT AGAGCTACCC
GAGGGGGTCT GGTACTACCT CTTCTCGCTG GGGGGTAGGC GCGCGGTCGA CCCGGAGAAC
CCCGAGACCA CCGTCTACTC GAGGAGGGCT TACAAGTTTG AGGAGAGGGT TAGCGTGGCT
AAGCTCCTTG GCTTCGACCC GGCGTCCTGC AACGGCTTCT GCGAGGAGGC ATTGTACCAC
TACCCGAGCT TGACCTACGT TTACCCCTTC GGGGGCGTGC TCTTCGTTAG GCTCAGGGCG
CTCAGGGGGA GCCTCCAGAA GGCTTTCTTG GTTGTCGACG GCAGGAGGCT GGAGATGAGG
CTGAAGGCCC GCGACGAGGT ATTCGACTAC TACGAGGCGA GCCTCGAGGC GGGCGGGGAG
GTATCCTACT ACTTTGAGGT TCTCGGGGGA GGGAGGCTCC ACCGCTACGG GGAGTTCTCC
GTAGACGTCA AGTCCCTGGA AAGCCTTATC CGGGTGCCGG AGTGGGTGTA CGGAAGCGTG
TTCTACCAGA TTATGCCGGA CAGGTTCGCG GAGGGAGGCC TCGAAGAGAT AGCCGAAAGG
CTAAACCACG TCTCGGGGCT GGGGGCGAAC GCGCTGTACC TTACCCCCAT CTTCGAGTCC
ACGACTTACC ACGGCTACGA CGTCGTGGAC TACTACCGCG TAGCCGGCAG GCTCGGCGGG
GACGAGGCGT TCGGGAGGCT CCTCGCGGAG CTGAAGAAGA GGGGGATGAG GGTAGTACTG
GACGGAGTCT TCCACCACAC GAGCTTCTTT CACCCGTACT TCCAGGACCT CGTGGAGAAG
GGGGAGGAGT CGCGGTACAA GGGCTTCTAC AGGGTGCTGG GCTTCCCCGT CGTCCCGCGG
GAGTTCCTCG AAGCCCTGAG GTCCGGGGCG CCGCGGCACG AGCTGAAGAA GTACCCGCGG
AGGTACGAGA GCTTCTTCGA CGTATGGCTG ATGCCCCGCC TGAACCACGA CAACCCGGAG
GTCAGGAGCT TCATAACCGG CGTCGGCAGG TACTGGGTCT CCAGGGGGGT AGACGGCTGG
AGGCTAGACG TGGCGCACGG CGTGCCCCCC GAGCTTTGGA GGGAGTTCAG GGAGACCCTC
CCAGGGGACG TCTACCTCTT CGGCGAGGTC ATGGACGACG CGCGCATATG GCTCTTCGAC
AAGTTCCACG GCGCTATGAA CTACCTGCTC TACGACGCGG TTCTCAGGTT CTTCGCCTAC
CGGGAGATAA CCGCCGAGGA GTTCCTCAAC AGGCTCGAGC TTCTAAGCGT GTACTACGGC
CCCGGGGAGT ACGCGATGTA CAACTTCCTC GACAACCACG ACGTGGACAG GCTCCTATCC
CTCGTGGGCG ACAGGGACAA GTACCTCTGC GCCCTGGTCT TCCTCTTCAC GTACAAGGGG
GTCCCCTCCA TATACTACGG CGACGAGGTA GGCCTGGAGA ACACGGACTC GCCGTTCATG
GAGCGTTCCA GGGCCCCCAT GCGCTGGGAC GAGTCAACCT GGGACAAAGC GATACTGGAG
GCTACGAGGG CGCTGGCGTC GCTTAGGAGG AGGAGCGCGG CGCTACAGAG AGGGGCATTC
GAGCCGGTGA GATTCGAGGG AGGGCTACTC GTGTACAGGA GGAGACTCGG CGACGAAAGC
ATCCTCGTCG CCATAAACTA CTCCGAAAGC GAAGCCGTAC TCGAAGAGCC CGCGCAGAGC
GTGCTCTTCC GCTCGGGAAG CGTCAAAGAA AAGCTTCTAG GACCGTTCTC CAGCGTAGTC
GCCGGAGACC GCTAA
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| Protein sequence | MYRVLGFRDD VYLGRVVKAE FSAPREGEYA YLLGNFNAFN EGSFRMRGAG DRWVVEVELP
EGVWYYLFSL GGRRAVDPEN PETTVYSRRA YKFEERVSVA KLLGFDPASC NGFCEEALYH
YPSLTYVYPF GGVLFVRLRA LRGSLQKAFL VVDGRRLEMR LKARDEVFDY YEASLEAGGE
VSYYFEVLGG GRLHRYGEFS VDVKSLESLI RVPEWVYGSV FYQIMPDRFA EGGLEEIAER
LNHVSGLGAN ALYLTPIFES TTYHGYDVVD YYRVAGRLGG DEAFGRLLAE LKKRGMRVVL
DGVFHHTSFF HPYFQDLVEK GEESRYKGFY RVLGFPVVPR EFLEALRSGA PRHELKKYPR
RYESFFDVWL MPRLNHDNPE VRSFITGVGR YWVSRGVDGW RLDVAHGVPP ELWREFRETL
PGDVYLFGEV MDDARIWLFD KFHGAMNYLL YDAVLRFFAY REITAEEFLN RLELLSVYYG
PGEYAMYNFL DNHDVDRLLS LVGDRDKYLC ALVFLFTYKG VPSIYYGDEV GLENTDSPFM
ERSRAPMRWD ESTWDKAILE ATRALASLRR RSAALQRGAF EPVRFEGGLL VYRRRLGDES
ILVAINYSES EAVLEEPAQS VLFRSGSVKE KLLGPFSSVV AGDR
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