| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1433 |
|---|
| Symbol | |
|---|
| ID | 4601363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1386206 |
|---|
| End bp | 1386607 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639774208 |
|---|
| Product | DNA polymerase beta subunit |
|---|
| Protein accession | YP_920833 |
|---|
| Protein GI | 119720338 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.855989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAGGG CGGATGCGTA CGTTGACTTC GTTAGGGAGA AGATGAGGCT GTTGTCTAGG
TTTCGCGAGC TAGCGCCGTC TGTGCTCAGC GTGGTTAAGC GTGTGCTGAG TGAGTATGGA
GTTGACGACG AGATATTCTT CTTCGGATCC ATCGTTGACG GTAAGTACAC GGCTGCAAGC
GATGTGGATA TCGCTGTGGT GGTTAGGGAG GTGCCGAGGA ATAGGTCCGA GATCGCCGGT
AAGATTGTGG AGGAGTTAGA AAAAATAGGC GTACCGAGTT GGTTCCCACT TGAGATACAC
TTTCTAACCC CGGACTTATT CGAGGCACTT AGGAGAGGCG GTGCGAACTT TGTCCGGGCT
GAGGACTTCG TAGGAACGGC TAACGGCGCT AATGAGAAGT AA
|
|---|
| Protein sequence | MSRADAYVDF VREKMRLLSR FRELAPSVLS VVKRVLSEYG VDDEIFFFGS IVDGKYTAAS
DVDIAVVVRE VPRNRSEIAG KIVEELEKIG VPSWFPLEIH FLTPDLFEAL RRGGANFVRA
EDFVGTANGA NEK
|
|---|
| |