Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1158 |
Symbol | |
ID | 4602160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1098127 |
End bp | 1098606 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639773934 |
Product | aspartate carbamoyltransferase regulatory subunit |
Protein accession | YP_920559 |
Protein GI | 119720064 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1781] Aspartate carbamoyltransferase, regulatory subunit |
TIGRFAM ID | [TIGR00240] aspartate carbamoyltransferase, regulatory subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0373635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAGGAAG GGTTGCTCGT CAGGAAGATT AGGGAGGGCA CGGTGATCGA CCACATACCC GCCGGGAGGG CTCTCAACGT GCTGAAGATC CTCGGACTCA CGGGCCGGGA GGGCTTAACG ATAGCGGTGG TCATGAACGT TCCGAGCAGG AAGCTCGGGG TGAAGGACAT AGTGAAGGTC GAGAAGAGGT TCCTCGAGCC CTCCGAGGTG GACAAGATAG CCCTCATAGC CCCGTCCGCC ACTATAAACA TAATCAGGGA CTTCCAGGTA GCGTCGAAGA GGCGCGTCGA GCCACCCGCG GTGGTTACAG GCATACTGCG CTGCCCGAAC CCCAACTGCG TCACGAACTC GGAGCGGGAG CCCGTCACCC CGAGGTTCGT CAGGGTTTCC CTCAGCCCGC TGAAACTCAA GTGCGCGTAC TGCGAGGAAA CGCTCAGCGA GGCCGAGATC GTAGACCAGC TCGTGAGCCC CTATGGGTAG
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Protein sequence | MEEGLLVRKI REGTVIDHIP AGRALNVLKI LGLTGREGLT IAVVMNVPSR KLGVKDIVKV EKRFLEPSEV DKIALIAPSA TINIIRDFQV ASKRRVEPPA VVTGILRCPN PNCVTNSERE PVTPRFVRVS LSPLKLKCAY CEETLSEAEI VDQLVSPYG
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