Gene Tpen_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0925 
Symbol 
ID4600821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp872345 
End bp872683 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content53% 
IMG OID639773704 
Producthypothetical protein 
Protein accessionYP_920329 
Protein GI119719834 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGTG GCTCTCGGCT TAGAAAACTT CTGAGGTTGC CGCAAGGCTT TATAACCGCG 
CGTACAACAT CGCAGACGAT GTCGTCGAGT GTTTTCCAGA GGAAGGATGT CCCGGTCGTA
AACGTCGGGA AGAAGGGTCT CGACGAGGGG GTCATCGAGG AGATAAACAA CATACTCGAG
TCAAGAGGTA TAGTCAAGGT CAAGTTGCTA AAGAACTTCA GAGAGACTTA CGGGCTATCG
CCAGAGGAGG TTGCAGTCAT AATATCGCAG AGGCTCGGAG CGGAAATCCT GGGGGTCAGG
GGCTTCGTCA TAGCATTCAG GAAACGCAGA GCCGCTTAG
 
Protein sequence
MRGGSRLRKL LRLPQGFITA RTTSQTMSSS VFQRKDVPVV NVGKKGLDEG VIEEINNILE 
SRGIVKVKLL KNFRETYGLS PEEVAVIISQ RLGAEILGVR GFVIAFRKRR AA