Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0606 |
Symbol | |
ID | 4601226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 560529 |
End bp | 561542 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639773381 |
Product | geranyltranstransferase |
Protein accession | YP_920014 |
Protein GI | 119719519 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCGGCTC GCGTACTTGA AAGGCTCGGG GAGATAGGTG CTCTAGTAGA CCCCGTTATG GAAAAGTACC TGCTCAGGGG CGCTAGCCCA GAGTTCCAGG ACGCTGTTCT TTACCAAGTG AGGATGGGAG GGAAAAGGGT TCGCCCAGCT CTTACAATAG CGAGCACGCT GGCAGTGGGC GGTAAAGAGG AGAACGCGTT GCCGGCTGCC GCGGCTGTAG AGCTTGCGCA TAATTATTCC CTCATACTTG ACGATATAAT CGACCACAGC GAGCTCCGCA GGGGTAAGCC TACCGTGTGG AAAAAGTACG GCATAAGCAC CGCGATACTC ATAGCCGTAC ATTACAGGGA AAGCATAACA GAGGCTTTGA ACGATACGCC AGAGCCGCCC GTTTTCCACG CCATCATGGC GGAGACAATA AAGCTCCTAA CTGACGGGGA GAGGCTGGAC ATACTCTTCG AGCAGTCGGG GAGGAGCGAC GAGCCGTACG TCGTGGAGCA ACGCTATAGA GCGGTGAGGC TTGATGACTA CCTACGCATG ATAGAGAGGA AAACGGCGAA GCTCATAGAG ACATCCTGCG TGTTCGGAGC CCTCTCGGCG GGGCAAAGAG GAGAGATCCT CGAGGCTCTA CGGGAGTACG GGTACAACCT GGGAATGGCT TTCCAAGTGG GAGACGACAT AATAGACATT TTCGGCGAAG AGGAGAAAAC CGGGAAAAGG GTTGGAGGAG ACATTAAGGA GCATAAGCTG GGAAATGTCG TGGTGCTCCT AGCGCTCGAG GAGACGAGGG ACAAGGAGAG GCTCCTCGCC ATACTGAGGA AGGAGGACGT GTCCTGGGAG GAAGTGAAAG AGGCTATAAG TATAATCTCT GAAACGAATG CGCGCGAAAA GGCCGAGGTT TTGCGAAGGG ACTACGTATC CCGCGCCTTG AAGGCTTTAG AGAAGCTTCC GCGAAGCGAG TACAGGGACA TGCTCGAAGA ACTGGCAGTG TTCATAGAGA AGAGAGAGTT CTAA
|
Protein sequence | MSARVLERLG EIGALVDPVM EKYLLRGASP EFQDAVLYQV RMGGKRVRPA LTIASTLAVG GKEENALPAA AAVELAHNYS LILDDIIDHS ELRRGKPTVW KKYGISTAIL IAVHYRESIT EALNDTPEPP VFHAIMAETI KLLTDGERLD ILFEQSGRSD EPYVVEQRYR AVRLDDYLRM IERKTAKLIE TSCVFGALSA GQRGEILEAL REYGYNLGMA FQVGDDIIDI FGEEEKTGKR VGGDIKEHKL GNVVVLLALE ETRDKERLLA ILRKEDVSWE EVKEAISIIS ETNAREKAEV LRRDYVSRAL KALEKLPRSE YRDMLEELAV FIEKREF
|
| |