Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0584 |
Symbol | |
ID | 4600699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 535094 |
End bp | 535810 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639773356 |
Product | proteasome subunit alpha |
Protein accession | YP_919992 |
Protein GI | 119719497 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCCGG CTGCTCCTAT GGCTGGTTAC GATAGAGCCA TCACGATATT CAGTCCTGAG GGCAGGCTGT ACCAGGTTGA GTACGCCTTT GAGGCTGTAA AGCGCGGTAT GACCGCGCTC GGCGTTAAGG CTGTTGACGG CGTTGTGCTG GCTGTTGAAA AGAGGAGCGC TTCGCCTCTA GTAGAGGGCA CCGAGAAGAT AAAGAAGATA GATAGCCATG TCGGCGTCGC GTTTGCCGGG CTCTTCGGTG ATGCCCGGGT CTTGATAGAC CAGGCGAGGA TATACGCGCA GTCCCACAGG CTTGTGTACG GTGAGCCGAT ACCGATAGAG TTGCTTGTGA AAAGGATATG CGACATAAAA CAGGTGTACA CGCAGCACGG CGGTGTGCGC CCCTTCGGGG TAGCTTTCCT TTTCGCAGGC GTTGACCGAA AGGGACCCCA CCTCATCCAA ACGGATCCCG GCGGTACATA CCTGAGGTGC AAGGCCCGCG CGATAGGTGC GGGTGCCCAG AAAGCCCTAG ACTTGTTTGT GAAGGAGTAC CACGACGACA TAAAAATCGA AGAAGCTACG CTACTAGCCT TGAGAGGGCT TAAGGAGGCA ATGGAAGACG GCTTCACACC GGAAAACATC GAGCTTGCCC GGATCGATGT CTACACGAAG GAGTTCAAAA TCTTCTCTAC CGAGGAGCTG GCGAAACTTT TCGAGAAACT ACGTTGA
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Protein sequence | MFPAAPMAGY DRAITIFSPE GRLYQVEYAF EAVKRGMTAL GVKAVDGVVL AVEKRSASPL VEGTEKIKKI DSHVGVAFAG LFGDARVLID QARIYAQSHR LVYGEPIPIE LLVKRICDIK QVYTQHGGVR PFGVAFLFAG VDRKGPHLIQ TDPGGTYLRC KARAIGAGAQ KALDLFVKEY HDDIKIEEAT LLALRGLKEA MEDGFTPENI ELARIDVYTK EFKIFSTEEL AKLFEKLR
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