| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0401 |
|---|
| Symbol | |
|---|
| ID | 4602115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 361998 |
|---|
| End bp | 362906 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639773164 |
|---|
| Product | signal-transduction protein |
|---|
| Protein accession | YP_919813 |
|---|
| Protein GI | 119719318 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTATGA GAGTCAGTGA GCTACCTGTT GGGCGTTTCC CACCGCTCGC CGTCGTTCCC
AGCTCTTCCA GGGTTCTTGA CGTTCTAGTT GCCATGGGGC GTAACAGGGT TCGGCACGTA
CCGCTGGTTG ACGAGCGTGG GGTGTTGAAG GGGATGGTTT CCGCGAGGGA TCTGGTGGAC
TTCCTGGGTG GGAGGAGATT CAGGGACGTT GTCGAAGCTA GGTTTAACGG CGATGTTTAC
AAGGCGCTGG AGCAAACGGG CGTCGAGTTT CTCAAGTACG ATCCTCCTTA CGTTTATACT
CGCTCGGATC TGAGGGAAGT CATAGAGTTG ATGGTTGAAC GCGGTATAGG GGCTTTAGCG
GTGGTTGACG AGGATCTACG CGTTGTTGGC ATAGTTTCGG AGAGGCACGT GATTTCCCTT
CTAGCGAACG TTGAGACCCA CGTGAAGGTC AAGGAGATCA TGACTTCCGA GGTTGTCTAC
CTGTCGCCCA TGGACTCTCT CTTCGAAGGG ATGCGCGTTA TGTCGGAGAG GCGTATACGC
AGACTCCCTC TGGTCAGTGG TGAAGAGTTA CGCGGGATAG TTACGATCAA GGATGTCCTT
TCCTACGTGT CGAGGGAGGA CGTGCTGGCG AGGCTAAAGG AGGGGTCGAG GAGCGCGGTC
TACGACACGC CTCTCGTGTA CATCTCCTCG AAGCCCGTGC TAGCAGTCGA AGACGATGTG
GACGTGGGCT TGGCGGTAAG CTTGATGAAG AAGCACGGCA TCGGCGCGCT CGTTGTGACG
CACGACGGGA AGCCTAGAGG TATTGTCACC GAGAGGGATG TATTGACGCG TCTGCCGCGC
GTTAAAGGGG TGGAGATATT CCTCGACGAG GCTACGAAGA CGATCTTCGG GGGTAGGGTC
ACCTTCTGA
|
|---|
| Protein sequence | MVMRVSELPV GRFPPLAVVP SSSRVLDVLV AMGRNRVRHV PLVDERGVLK GMVSARDLVD
FLGGRRFRDV VEARFNGDVY KALEQTGVEF LKYDPPYVYT RSDLREVIEL MVERGIGALA
VVDEDLRVVG IVSERHVISL LANVETHVKV KEIMTSEVVY LSPMDSLFEG MRVMSERRIR
RLPLVSGEEL RGIVTIKDVL SYVSREDVLA RLKEGSRSAV YDTPLVYISS KPVLAVEDDV
DVGLAVSLMK KHGIGALVVT HDGKPRGIVT ERDVLTRLPR VKGVEIFLDE ATKTIFGGRV
TF
|
|---|
| |